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In an era shaped by Generative Artificial Intelligence for code generation and the rising adoption of Python-based Machine Learning systems (MLS), software quality has emerged as a major concern. As these systems grow in complexity and…

Software Engineering · Computer Science 2026-04-02 Mohamed Almukhtar , Anwar Ghammam , Marouane Kessentini , Hua Ming

Frontier Large language models (LLMs) like ChatGPT and Gemini can decipher cryptic compiler errors for novice programmers, but their computational scale, cost, and tendency to over-assist make them problematic for widespread pedagogical…

Computers and Society · Computer Science 2025-07-09 Lorenzo Lee Solano , Charles Koutcheme , Juho Leinonen , Alexandra Vassar , Jake Renzella

Large language models (LLMs) have demonstrated strong performance on function-level code generation benchmarks, yet real-world software development increasingly demands class-level implementations that integrate multiple methods,…

Software Engineering · Computer Science 2025-11-06 Musfiqur Rahman , SayedHassan Khatoonabadi , Emad Shihab

With the rapid development of AI technologies, thousands of AI papers are being published each year. Many of these papers have released sample code to facilitate follow-up researchers. This paper presents an explorative study of over 1700…

Digital Libraries · Computer Science 2019-03-06 Boyang Zhang

Many research fields are currently reckoning with issues of poor levels of reproducibility. Some label it a "crisis", and research employing or building Machine Learning (ML) models is no exception. Issues including lack of transparency,…

Software Engineering · Computer Science 2025-02-27 Harald Semmelrock , Tony Ross-Hellauer , Simone Kopeinik , Dieter Theiler , Armin Haberl , Stefan Thalmann , Dominik Kowald

The scarcity of high-quality annotated medical data, particularly in mental health, poses a significant bottleneck for training robust machine learning models. Privacy regulations restrict data sharing, making synthetic data generation a…

Recent advancements in large language models have sparked interest in utilizing them to aid the peer review process of scientific publication amid the peer review crisis. However, having AI models generate full reviews in the same way as…

Computation and Language · Computer Science 2026-04-03 Tianmai M. Zhang , Neil F. Abernethy

Large Language Models (LLMs) hold promise in addressing complex medical problems. However, while most prior studies focus on improving accuracy and reasoning abilities, a significant bottleneck in developing effective healthcare agents lies…

Computation and Language · Computer Science 2025-10-06 Weikang Qiu , Tinglin Huang , Ryan Rullo , Yucheng Kuang , Ali Maatouk , S. Raquel Ramos , Rex Ying

Reproducing machine learning papers is essential for scientific progress but remains challenging for both humans and automated agents. Existing agent-based methods often struggle to fully and accurately reproduce implementation details such…

Software Engineering · Computer Science 2025-08-26 Mingyang Zhou , Quanming Yao , Lun Du , Lanning Wei , Da Zheng

Large Language Models (LLM) are increasingly used for software development, yet existing benchmarks for LLM-based coding assistance do not reflect the constraints of High Energy Physics (HEP) and High Performance Computing (HPC) software.…

Large language models (LLMs) can answer questions and reason about complex tasks, also from the scientific domain. We assess several multimodal LLMs (MLLMs) on ScienceQA and find that Gemini models show the highest accuracy with little…

Computation and Language · Computer Science 2025-03-04 Florian Dreyer , Ekaterina Kolos , Daria Matiash

This study introduces a novel software tool leveraging large language model (LLM) prompts, designed to automate the generation of academic articles from Python code a significant advancement in the fields of biomedical informatics and…

Human-Computer Interaction · Computer Science 2024-04-30 Jeremy R. Harper

As large language models (LLMs) are increasingly applied to scientific reasoning, the complexity of answer formats and the diversity of equivalent expressions make answer verification a critical yet challenging task. Existing verification…

Artificial Intelligence · Computer Science 2025-09-30 Shenghe Zheng , Chenyu Huang , Fangchen Yu , Junchi Yao , Jingqi Ye , Tao Chen , Yun Luo , Ning Ding , LEI BAI , Ganqu Cui , Peng Ye

The rapid evolution of large language models (LLMs) has opened new possibilities for automating various tasks in software development. This paper evaluates the capabilities of the Llama 2-70B model in automating these tasks for scientific…

Software Engineering · Computer Science 2025-07-09 Patrick Diehl , Nojoud Nader , Maxim Moraru , Steven R. Brandt

Large language models (LLMs) have brought a paradigm shift to the field of code generation, offering the potential to enhance the software development process. However, previous research mainly focuses on the accuracy of code generation,…

Software Engineering · Computer Science 2025-06-24 Yanlin Wang , Tianyue Jiang , Mingwei Liu , Jiachi Chen , Mingzhi Mao , Xilin Liu , Yuchi Ma , Zibin Zheng

The rise of Large Language Models (LLMs) as coding agents promises to accelerate software development, but their impact on generated code reproducibility remains largely unexplored. This paper presents an empirical study investigating…

Software Engineering · Computer Science 2026-03-25 Bhanu Prakash Vangala , Ali Adibifar , Ashish Gehani , Tanu Malik

Large Language Models have gained remarkable interest in industry and academia. The increasing interest in LLMs in academia is also reflected in the number of publications on this topic over the last years. For instance, alone 78 of the…

Large Language Models frequently generate outputs that appear scientifically reasonable yet violate fundamental principles--a phenomenon we characterize as the "plausibility-validity gap." This challenge proves especially acute in…

Machine Learning · Computer Science 2026-01-07 Malikussaid , Hilal Hudan Nuha , Isman Kurniawan

Scientific problem-solving involves synthesizing information while applying expert knowledge. We introduce CURIE, a scientific long-Context Understanding,Reasoning and Information Extraction benchmark to measure the potential of Large…

Large language models (LLMs) are increasingly used to generate scientific reports, but they can produce references that appear plausible while containing corrupted metadata or pointing to papers that do not exist. We introduce CiteCheck, a…

Digital Libraries · Computer Science 2026-05-28 Khashayar Khajavi , Shaghayegh Sadeghi , Rise Adhikari , Alexander Tessier