Related papers: The Sequence Reconstruction of Permutations under …
Permutation codes in the Ulam metric, which can correct multiple deletions, have been investigated extensively recently. In this work, we are interested in the maximum size of permutation codes in the Ulam metric and aim to design…
An $(n,r,h,a,q)$-Local Reconstruction Code (LRC) is a linear code over $\mathbb{F}_q$ of length $n$, whose codeword symbols are partitioned into $n/r$ local groups each of size $r$. Each local group satisfies `$a$' local parity checks to…
Embedding graphs in a geographical or latent space, i.e.\ inferring locations for vertices in Euclidean space or on a smooth manifold or submanifold, is a common task in network analysis, statistical inference, and graph visualization. We…
This work is motivated by the problem of error correction in bit-shift channels with the so-called $ (d,k) $ input constraints (where successive $ 1 $'s are required to be separated by at least $ d $ and at most $ k $ zeros, $ 0 \leq d < k…
The text-to-pattern Hamming distances problem asks to compute the Hamming distances between a given pattern of length $m$ and all length-$m$ substrings of a given text of length $n\ge m$. We focus on the $k$-mismatch version of the problem,…
For any positive integers $k,r,n$ with $r \leq \min\{k,n\}$, let $\mathcal{P}_{k,r,n}$ be the family of all sets $\{(x_1,y_1), \dots, (x_r,y_r)\}$ such that $x_1, \dots, x_r$ are distinct elements of $[k] = \{1, \dots, k\}$ and $y_1, \dots,…
Generating functions for the size of a $r$-sphere, with respect to the Manhattan distance in an $n$-dimensional grid, are used to provide explicit formulas for the minimum and maximum size of an $r$-ball centered at a point of the grid.…
Motivated by applications in polymer-based data storage, we study the problem of reconstructing a string from part of its composition multiset. We give a full description of the structure of the strings that cannot be uniquely reconstructed…
Let $\mathcal{Q}$ be a vertex subset problem on graphs. In a reconfiguration variant of $\mathcal{Q}$ we are given a graph $G$ and two feasible solutions $S_s, S_t\subseteq V(G)$ of $\mathcal{Q}$ with $|S_s|=|S_t|=k$. The problem is to…
Given a set $I \subseteq \mathbb{N}$, consider the sequences $\{d_n(I)\},\{p_n(I)\}$ where for any $n$, $d_n(I)$ and $p_n(I)$ respectively count the number of permutations in the symmetric group $\mathfrak{S}_n$ whose descent set…
In this paper we study noisy sorting without re-sampling. In this problem there is an unknown order $a_{\pi(1)} < ... < a_{\pi(n)}$ where $\pi$ is a permutation on $n$ elements. The input is the status of $n \choose 2$ queries of the form…
We develop a new approach to approximate families of sets, complementing the existing `$\Delta$-system method' and `junta approximations method'. The approach, which we refer to as `spread approximations method', is based on the notion of…
It is a well known that, for odd $n$, the number of subsets of $\{1,2,\dots,n\}$ the sum of whose elements is divisible by $n$ equals the number of binary necklaces of length $n$. In this paper generalize this result in two directions. On…
The task of the binary classification problem is to determine which of two distributions has generated a length-$n$ test sequence. The two distributions are unknown; two training sequences of length $N$, one from each distribution, are…
Trace reconstruction is the problem of learning an unknown string $x$ from independent traces of $x$, where traces are generated by independently deleting each bit of $x$ with some deletion probability $q$. In this paper, we initiate the…
We estimate the minimum number of distance queries that is sufficient to reconstruct the binomial random graph $G(n,p)$ with constant diameter with high probability. We get a tight (up to a constant factor) answer for all $p>n^{-1+o(1)}$…
An error model with asymmetric single magnitude four error is considered. This paper is about constructions of codes correcting single error over $\mathbb{Z}_{2^{a}3^{b}r}$. Firstly, we reduce the construction of a maximal size…
In this paper, we consider a certain variation of the "isoperimetric problem" adopted for subsets of nonnegative integers. More specifically, we explore the sequence P(n) as described in OEIS A186053. We provide the first exact formulas for…
A method to construct and count all the linear codes (of arbitrary length) in $\mathbb{F}_{4}$ that are invariant under reverse permutation and that contain the repetition code is presented. These codes are suitable for constructing DNA…
Permutations are usually enumerated by size, but new results can be found by enumerating them by inversions instead, in which case one must restrict one's attention to indecomposable permutations. In the style of the seminal paper by Simion…