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Background: The surge in single-cell omics data exposes limitations in traditional, manually defined analysis workflows. AI agents offer a paradigm shift, enabling adaptive planning, executable code generation, traceable decisions, and…

Genomics · Quantitative Biology 2026-03-17 Yang Liu , Lu Zhou , Xiawei Du , Ruikun He , Xuguang Zhang , Rongbo Shen , Yixue Li

Contemporary large language model (LLM)-based multi-agent systems exhibit systematic advantages in deep research tasks, which emphasize iterative, vertically structured information seeking. However, when confronted with wide search tasks…

Multiagent Systems · Computer Science 2026-02-03 Mingju Chen , Guibin Zhang , Heng Chang , Yuchen Guo , Shiji Zhou

Since the advent of Large Language Models (LLMs), various research based on such models have maintained significant academic attention and impact, especially in AI and robotics. In this paper, we propose a multi-agent framework with LLMs to…

Robotics · Computer Science 2025-05-12 Junhong Chen , Ziqi Yang , Haoyuan G Xu , Dandan Zhang , George Mylonas

Scaffolding Large Language Models (LLMs) into multi-agent systems often improves performance on complex tasks, but the safety impact of such scaffolds has not been thoroughly explored. We introduce AgentBreeder, a framework for…

Cryptography and Security · Computer Science 2025-10-15 J Rosser , Jakob Foerster

The remarkable capabilities of Large Language Model (LLM)-driven agents have enabled sophisticated systems to tackle complex, multi-step tasks, but their escalating costs threaten scalability and accessibility. This work presents the first…

High-dimensional decision-making tasks, such as business partner selection, involve evaluating large candidate pools with heterogeneous numerical, categorical, and textual features. While large language models (LLMs) offer strong in-context…

Multiagent Systems · Computer Science 2025-11-03 Lingyao Li , Haolun Wu , Zhenkun Li , Jiabei Hu , Yu Wang , Xiaoshan Huang , Wenyue Hua , Wenqian Wang

Issue resolution has made remarkable progress thanks to the advanced reasoning capabilities of large language models (LLMs). Recently, agent-based frameworks such as SWE-agent have further advanced this progress by enabling autonomous,…

Software Engineering · Computer Science 2025-08-01 Han Li , Yuling Shi , Shaoxin Lin , Xiaodong Gu , Heng Lian , Xin Wang , Yantao Jia , Tao Huang , Qianxiang Wang

Vision-language models (VLMs) have achieved strong performance in multimodal understanding and reasoning, yet grounded reasoning in 3D scenes remains underexplored. Effective 3D reasoning hinges on accurate grounding: to answer open-ended…

Computer Vision and Pattern Recognition · Computer Science 2026-04-13 Henry Zheng , Chenyue Fang , Rui Huang , Siyuan Wei , Xiao Liu , Gao Huang

LLM agents are increasingly expected to function as general-purpose systems capable of resolving open-ended user requests. While existing benchmarks focus on domain-aware environments for developing specialized agents, evaluating…

Artificial Intelligence · Computer Science 2026-02-24 Xiaochuan Li , Ryan Ming , Pranav Setlur , Abhijay Paladugu , Andy Tang , Hao Kang , Shuai Shao , Rong Jin , Chenyan Xiong

The development of LLM-based autonomous agents for end-to-end software development represents a significant paradigm shift in software engineering. However, the scientific evaluation of these systems is hampered by significant challenges,…

Software Engineering · Computer Science 2025-11-07 Zhengran Zeng , Yixin Li , Rui Xie , Wei Ye , Shikun Zhang

With the development of artificial intelligence (AI), large language models (LLM) are widely used in many fields. However, the reasoning ability of LLM is still very limited when it comes to mathematical reasoning. Mathematics plays an…

Computation and Language · Computer Science 2024-08-06 Wenbei Xie , Donglin Liu , Haoran Yan , Wenjie Wu , Zongyang Liu

We study predictive multilingual evaluation: estimating how well a model will perform on a task in a target language when direct benchmark results are missing. This problem is common in multilingual deployment, where evaluation coverage is…

Computation and Language · Computer Science 2026-04-13 Avni Mittal , Shanu Kumar , Sandipan Dandapat , Monojit Choudhury

Recent progress in multimodal reasoning has enabled agents that interpret imagery, connect it with language, and execute structured analytical tasks. Extending these capabilities to remote sensing remains challenging, as models must reason…

Recent advances in large language models (LLMs) transform how machine learning (ML) pipelines are developed and evaluated. LLMs enable a new type of workload, agentic pipeline search, in which autonomous or semi-autonomous agents generate,…

Databases · Computer Science 2026-03-06 Arnab Phani , Elias Strauss , Sebastian Schelter

While integrating tools like Code Interpreter and Search has significantly enhanced Large Language Model (LLM) reasoning in models like ChatGPT Agent and Gemini-Pro, practical guidance on optimal tool use is lacking. The core challenge is…

Computation and Language · Computer Science 2025-10-03 Yongchao Chen , Jiefeng Chen , Rui Meng , Ji Yin , Na Li , Chuchu Fan , Chi Wang , Tomas Pfister , Jinsung Yoon

The evolution of Large Language Models (LLMs) from passive text processors to autonomous agents has established planning as a core component of modern intelligence. However, achieving generalized planning remains elusive, not only by the…

Large Language Model (LLM)-empowered multi-agent systems extend the cognitive boundaries of individual agents through disciplined collaboration and interaction, while constructing these systems often requires labor-intensive manual designs.…

Machine Learning · Computer Science 2025-06-10 Guibin Zhang , Luyang Niu , Junfeng Fang , Kun Wang , Lei Bai , Xiang Wang

Large language models (LLMs) such as GPT and Gemini have demonstrated remarkable capabilities in contextual understanding and reasoning. The strong performance of LLMs has sparked growing interest in leveraging them to automate tasks…

Artificial Intelligence · Computer Science 2026-03-10 Ziheng Geng , Jiachen Liu , Ran Cao , Lu Cheng , Dan M. Frangopol , Minghui Cheng

Large Language Models (LLMs) have shown remarkable performance in completing various tasks. However, solving complex problems often requires the coordination of multiple agents, raising a fundamental question: how to effectively select and…

Computation and Language · Computer Science 2026-04-02 Eric Hanchen Jiang , Levina Li , Rui Sun , Xiao Liang , Yubei Li , Yuchen Wu , Haozheng Luo , Hengli Li , Zhi Zhang , Zhaolu Kang , Kai-Wei Chang , Ying Nian Wu

This study aims to systematically evaluate the performance of large language models (LLMs) in abstract visual reasoning problems. We examined four LLM models (GPT-4.1-Mini, Claude-3.5-Haiku, Gemini-1.5-Flash, Llama-3.3-70b) utilizing four…

Artificial Intelligence · Computer Science 2025-11-18 Sinan Urgun , Seçkin Arı
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