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In fluorescence microscopy, spectral unmixing aims to recover individual fluorophore concentrations from spectral images that capture mixed fluorophore emissions. Since classical methods operate pixel-wise and rely on least-squares fitting,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Federico Carrara , Talley Lambert , Mehdi Seifi , Florian Jug

Automated cell detection and localization from microscopy images are significant tasks in biomedical research and clinical practice. In this paper, we design a new cell detection and localization algorithm that combines deep convolutional…

Computer Vision and Pattern Recognition · Computer Science 2018-10-09 Yao Xue , Gilbert Bigras , Judith Hugh , Nilanjan Ray

Detecting objects in urban traffic images presents considerable difficulties because of the following reasons: 1) These images are typically immense in size, encompassing millions or even hundreds of millions of pixels, yet computational…

Computer Vision and Pattern Recognition · Computer Science 2025-01-24 Changhui Deng , Lieyang Chen , Shinan Liu

Compressed sensing fluorescence microscopy (CS-FM) proposes a scheme whereby less measurements are collected during sensing and reconstruction is performed to recover the image. Much work has gone into optimizing the sensing and…

Image and Video Processing · Electrical Eng. & Systems 2021-07-13 Alan Q. Wang , Aaron K. LaViolette , Leo Moon , Chris Xu , Mert R. Sabuncu

All-in-one image restoration seeks to recover clean images from inputs affected by diverse and unknown degradations using a unified framework. Recent methods have shown strong performance by identifying degradation characteristics to guide…

Computer Vision and Pattern Recognition · Computer Science 2026-05-14 Eunho Lee , Rei Kawakami , Youngbae Hwang

Molecule discovery is a pivotal research field, impacting everything from medicine to materials. Recently, Large Language Models (LLMs) have been widely adopted in molecular understanding and generation, serving as a bridge between the…

Computation and Language · Computer Science 2026-04-29 Jiatong Li , Yunqing Liu , Wei Liu , Jingdi Le , Di Zhang , Wenqi Fan , Dongzhan Zhou , Yuqiang Li , Qing Li

We address the problem of learning on sets of features, motivated by the need of performing pooling operations in long biological sequences of varying sizes, with long-range dependencies, and possibly few labeled data. To address this…

Machine Learning · Computer Science 2021-02-11 Grégoire Mialon , Dexiong Chen , Alexandre d'Aspremont , Julien Mairal

Neural Fields (NF) have gained prominence as a versatile framework for complex data representation. This work unveils a new problem setting termed \emph{Meta-Continual Learning of Neural Fields} (MCL-NF) and introduces a novel strategy that…

Artificial Intelligence · Computer Science 2026-02-24 Seungyoon Woo , Junhyeog Yun , Gunhee Kim

Simulated Moving Bed (SMB) chromatography is a well-known technique for the resolution of several high-value-added compounds. Parameters identification and model topology definition are arduous when one is dealing with complex systems such…

Single cell analysis of skeletal muscle (SM) tissue is a fundamental tool for understanding many neuromuscular disorders. For this analysis to be reliable and reproducible, identification of individual fibres within microscopy images…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Atif Khan , Conor Lawless , Amy Vincent , Charlotte Warren , Valeria Di Leo , Tiago Gomes , A. Stephen McGough

Training a Deep Neural Network (DNN) from scratch requires a large amount of labeled data. For a classification task where only small amount of training data is available, a common solution is to perform fine-tuning on a DNN which is…

Computer Vision and Pattern Recognition · Computer Science 2017-09-12 Ying Lu , Liming Chen , Alexandre Saidi

Brain midline shift (MLS) is one of the most critical factors to be considered for clinical diagnosis and treatment decision-making for intracranial hemorrhage. Existing computational methods on MLS quantification not only require intensive…

Computer Vision and Pattern Recognition · Computer Science 2023-01-03 Shizhan Gong , Cheng Chen , Yuqi Gong , Nga Yan Chan , Wenao Ma , Calvin Hoi-Kwan Mak , Jill Abrigo , Qi Dou

Fluorescent molecules are versatile nanoscale emitters that enable detailed observations of biophysical processes with nanoscale resolution. Because they are well-approximated as electric dipoles, imaging systems can be designed to…

Optics · Physics 2024-03-26 Tingting Wu , Matthew D. Lew

Merging models fine-tuned for different tasks into a single unified model has become an increasingly important direction for building versatile, efficient multi-task systems. Existing approaches predominantly rely on parameter interpolation…

Machine Learning · Computer Science 2025-11-26 Zecheng Pan , Zhikang Chen , Ding Li , Min Zhang , Sen Cui , Hongshuo Jin , Luqi Tao , Yi Yang , Deheng Ye , Yu Zhang , Tingting Zhu , Tianling Ren

The field of chemistry and Artificial Intelligence (AI) intersection is an area of active research that aims to accelerate scientific discovery. The integration of large language models (LLMs) with scientific modalities has shown…

Computation and Language · Computer Science 2024-07-16 Dimitris Gkoumas

Molecular systems can exhibit a complex, chemically tailorable inner structure which allows for targeting of specific mechanical, electronic and optical properties. At the single-molecule level, two major complementary ways to explore these…

Mesoscale and Nanoscale Physics · Physics 2017-04-05 Rocco Gaudenzi , Maciej Misiorny , Enrique Burzurí , Maarten R. Wegewijs , Herre S. J. van der Zant

In this survey, we analyze the newest machine learning (ML) techniques for optical orthogonal frequency division multiplexing (O-OFDM)-based optical communications. ML has been proposed to mitigate channel and transceiver imperfections. For…

Machine Learning · Computer Science 2021-05-10 Hichem Mrabet , Elias Giaccoumidis , Iyad Dayoub

Light sheet fluorescence microscopy (LSM) enables high-resolution, three-dimensional (3D) imaging of biological specimens, providing rich volumetric data for studying cellular organization, pathology, and vascular networks. However, the…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Adina Scheinfeld , Haotan Zhang , Shang Mu , Rudolf L. M. van Herten , Lucas Stoffl , Ali Erturk , Zhuhao Wu , Johannes C. Paetzold

Confocal laser scanning microscopy (CLSM) stands out as one of the most widely used microscopy techniques, thanks to its three-dimensional imaging capability and its sub-diffraction spatial resolution, achieved through the closure of a…

Spin-torque transfer magnetic random access memory (STT-MRAM) is a promising emerging non-volatile memory (NVM) technology with wide applications. However, the data recovery of STT-MRAM is affected by the diversity of channel raw bit error…

Information Theory · Computer Science 2024-10-08 Xingwei Zhong , Kui Cai , Peng Kang , Guanghui Song , Bin Dai