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Melanoma detection is vital for early diagnosis and effective treatment. While deep learning models on dermoscopic images have shown promise, they require specialized equipment, limiting their use in broader clinical settings. This study…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Volodymyr Sydorskyi , Igor Krashenyi , Oleksii Yakubenko

Reliable detection and segmentation of human hands are critical for enhancing safety and facilitating advanced interactions in human-robot collaboration. Current research predominantly evaluates hand segmentation under in-distribution (ID)…

Computer Vision and Pattern Recognition · Computer Science 2025-07-02 Reza Jalayer , Yuxin Chen , Masoud Jalayer , Carlotta Orsenigo , Masayoshi Tomizuka

There exists a large number of datasets for organ segmentation, which are partially annotated, and sequentially constructed. A typical dataset is constructed at a certain time by curating medical images and annotating the organs of…

Computer Vision and Pattern Recognition · Computer Science 2023-05-09 Pengbo Liu , Li Xiao , S. Kevin Zhou

Optical coherence tomography offers astounding opportunities to image the complex structure of living tissue, but lacks functional information. We present dynamic full-field optical coherence tomography to image living human induced…

Sorting, filtering, moving and controlling colloidal particles is crucial in many fields, ranging from chemistry to biology and physics. Dielectrophoresis is an outstanding tool for the manipulation of small particles by AC electric fields,…

The most recent advances in medical imaging that have transformed diagnosis, especially in the case of interpreting X-ray images, are actively involved in the healthcare sector. The advent of digital image processing technology and the…

Image and Video Processing · Electrical Eng. & Systems 2024-06-21 Abhishek Swami , Snehal Farande , Atharv Patil , Atharva Parle , Vivekanand Mane , Prathamesh Thorat

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

Despite the considerable progress in automatic abdominal multi-organ segmentation from CT/MRI scans in recent years, a comprehensive evaluation of the models' capabilities is hampered by the lack of a large-scale benchmark from diverse…

Image and Video Processing · Electrical Eng. & Systems 2022-09-05 Yuanfeng Ji , Haotian Bai , Jie Yang , Chongjian Ge , Ye Zhu , Ruimao Zhang , Zhen Li , Lingyan Zhang , Wanling Ma , Xiang Wan , Ping Luo

Microorganisms are widely distributed in the human daily living environment. They play an essential role in environmental pollution control, disease prevention and treatment, and food and drug production. The analysis of microorganisms is…

Computer Vision and Pattern Recognition · Computer Science 2022-03-25 Jinghua Zhang , Chen Li , Yimin Yin , Jiawei Zhang , Marcin Grzegorzek

Deep learning has transformed the way large and complex image datasets can be processed, reshaping what is possible in bioimage analysis. As the complexity and size of bioimage data continues to grow, this new analysis paradigm is becoming…

Quantitative Methods · Quantitative Biology 2021-08-03 Adrien Hallou , Hannah Yevick , Bianca Dumitrascu , Virginie Uhlmann

Deep learning in medical imaging faces obstacles: limited data diversity, ethical issues, high acquisition costs, and the need for precise annotations. Bleeding detection and localization during surgery is especially challenging due to the…

Image and Video Processing · Electrical Eng. & Systems 2025-06-18 Niran Nataraj , Maina Sogabe , Kenji Kawashima

In the field of transmission electron microscopy, data interpretation often lags behind acquisition methods, as image processing methods often have to be manually tailored to individual datasets. Machine learning offers a promising approach…

Image and Video Processing · Electrical Eng. & Systems 2021-07-07 C. K. Groschner , Christina Choi , M. C. Scott

Coherent microscopy techniques provide an unparalleled multi-scale view of materials across scientific and technological fields, from structural materials to quantum devices, from integrated circuits to biological cells. Driven by the…

The development of single-cell and spatial transcriptomics has revolutionized our capacity to investigate cellular properties, functions, and interactions in both cellular and spatial contexts. However, the analysis of single-cell and…

Genomics · Quantitative Biology 2024-12-09 Shuang Ge , Shuqing Sun , Huan Xu , Qiang Cheng , Zhixiang Ren

Synchrotron infrared hyperspectral microscopy is a label-free and non-invasive technique well suited for imaging of chemical events in situ. It can track the spatial and temporal distributions of molecules of interests in a specimen in its…

Biological Physics · Physics 2021-07-20 Hoi-Ying N. Holman , Wujun Zhao , Jennifer D. Nill , Liang Chen , Sankar Raju Narayanasamy , Tina Jeoh

We propose a novel point cloud based 3D organ segmentation pipeline utilizing deep Q-learning. In order to preserve shape properties, the learning process is guided using a statistical shape model. The trained agent directly predicts…

Computer Vision and Pattern Recognition · Computer Science 2018-06-18 Xia Zhong , Mario Amrehn , Nishant Ravikumar , Shuqing Chen , Norbert Strobel , Annette Birkhold , Markus Kowarschik , Rebecca Fahrig , Andreas Maier

Deep learning is transforming most areas of science and technology, including electron microscopy. This review paper offers a practical perspective aimed at developers with limited familiarity. For context, we review popular applications of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Jeffrey M. Ede

Analyzing the dynamic changes of cellular morphology is important for understanding the various functions and characteristics of live cells, including stem cells and metastatic cancer cells. To this end, we need to track all points on the…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Junbong Jang , Kwonmoo Lee , Tae-Kyun Kim

Metabolomic data sets provide a direct read-out of cellular phenotypes and are increasingly generated to study biological questions. Our previous work revealed the potential of analyzing extracellular metabolomic data in the context of the…

Molecular Networks · Quantitative Biology 2016-06-10 Maike K. Aurich , Ronan M. T. Fleming , Ines Thiele

Deep-learning (DL) based methods are playing an important role in the task of abdominal organs and tumors segmentation in CT scans. However, the large requirements of annotated datasets heavily limit its development. The FLARE23 challenge…

Image and Video Processing · Electrical Eng. & Systems 2023-10-03 Jiaxin Zhuang , Luyang Luo , Zhixuan Chen , Linshan Wu
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