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Graph neural network (GNN) pre-training methods have been proposed to enhance the power of GNNs. Specifically, a GNN is first pre-trained on a large-scale unlabeled graph and then fine-tuned on a separate small labeled graph for downstream…

Machine Learning · Computer Science 2022-09-16 Simiao Zuo , Haoming Jiang , Qingyu Yin , Xianfeng Tang , Bing Yin , Tuo Zhao

Recoil-imaging gaseous time projection chambers (TPCs) with directional sensitivity are attractive for dark matter (DM) searches. Detectors capable of reconstructing 3D nuclear recoil directions would be uniquely sensitive to the predicted…

Instrumentation and Detectors · Physics 2022-06-23 J. Schueler , M. Ghrear , S. E. Vahsen , P. Sadowski , C. Deaconu

Many real-world time series, such as in health, have changepoints where the system's structure or parameters change. Since changepoints can indicate critical events such as onset of illness, it is highly important to detect them. However,…

Machine Learning · Computer Science 2019-05-17 Zahra Ebrahimzadeh , Min Zheng , Selcuk Karakas , Samantha Kleinberg

In the pursuit of identifying rare two-particle events within the GADGET II Time Projection Chamber (TPC), this paper presents a comprehensive approach for leveraging Convolutional Neural Networks (CNNs) and various data processing methods.…

Prediction of particle radiative heat transfer flux is an important task in the large discrete granular systems, such as pebble bed in power plants and industrial fluidized beds. For particle motion and packing, discrete element method…

Soft Condensed Matter · Physics 2020-06-24 Hao Wu , Shuang Hao

Nuclei classification is a critical step in computer-aided diagnosis with histopathology images. In the past, various methods have employed graph neural networks (GNN) to analyze cell graphs that model inter-cell relationships by…

Computer Vision and Pattern Recognition · Computer Science 2024-02-21 Wei Lou , Guanbin Li , Xiang Wan , Haofeng Li

We apply deep neural networks (DNN) to data from the EXO-200 experiment. In the studied cases, the DNN is able to reconstruct the relevant parameters - total energy and position - directly from raw digitized waveforms, with minimal…

In-time particle trajectory reconstruction in the Large Hadron Collider is challenging due to the high collision rate and numerous particle hits. Using GNN (Graph Neural Network) on FPGA has enabled superior accuracy with flexible…

Hardware Architecture · Computer Science 2023-06-28 Shi-Yu Huang , Yun-Chen Yang , Yu-Ru Su , Bo-Cheng Lai , Javier Duarte , Scott Hauck , Shih-Chieh Hsu , Jin-Xuan Hu , Mark S. Neubauer

Graph Neural Networks (GNNs) have become a central tool for learning on graph-structured data, yet their applicability to real-world systems remains limited by key challenges such as scalability, temporality, directionality, data…

Machine Learning · Computer Science 2025-10-28 Emanuele Rossi

Semantic scene understanding from point clouds is particularly challenging as the points reflect only a sparse set of the underlying 3D geometry. Previous works often convert point cloud into regular grids (e.g. voxels or bird-eye view…

Computer Vision and Pattern Recognition · Computer Science 2020-12-01 Yinyu Nie , Ji Hou , Xiaoguang Han , Matthias Nießner

Graph neural networks (GNNs) have been widely used in representation learning on graphs and achieved state-of-the-art performance in tasks such as node classification and link prediction. However, most existing GNNs are designed to learn…

Machine Learning · Computer Science 2020-02-06 Seongjun Yun , Minbyul Jeong , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

Digital neuron reconstruction from 3D microscopy images is an essential technique for investigating brain connectomics and neuron morphology. Existing reconstruction frameworks use convolution-based segmentation networks to partition the…

Computer Vision and Pattern Recognition · Computer Science 2022-10-19 Runkai Zhao , Heng Wang , Chaoyi Zhang , Weidong Cai

A novel graph-to-tree conversion mechanism called the deep-tree generation (DTG) algorithm is first proposed to predict text data represented by graphs. The DTG method can generate a richer and more accurate representation for nodes (or…

Computation and Language · Computer Science 2018-09-06 Fenxiao Chen , Bin Wang , C. -C. Jay Kuo

Molecule property prediction is a fundamental problem for computer-aided drug discovery and materials science. Quantum-chemical simulations such as density functional theory (DFT) have been widely used for calculating the molecule…

Machine Learning · Computer Science 2019-11-26 Hiroyuki Shindo , Yuji Matsumoto

The identification of $\gamma$-rays from the predominant hadronic-background is a key aspect in their ground-based detection using Imaging Atmospheric Cherenkov Telescopes (IACTs). While current methods are limited in their ability to…

High Energy Astrophysical Phenomena · Physics 2025-10-08 Abhay Mehta , Dan Parsons , Tim Lukas Holch , David Berge , Matthias Weidlich

Graph neural networks are recognized for their strong performance across various applications, with the backpropagation algorithm playing a central role in the development of most GNN models. However, despite its effectiveness, BP has…

Machine Learning · Computer Science 2024-11-06 Gongpei Zhao , Tao Wang , Congyan Lang , Yi Jin , Yidong Li , Haibin Ling

Artificial intelligence is revolutionizing our lives at an ever increasing pace. At the heart of this revolution is the recent advancements in deep neural networks (DNN), learning to perform sophisticated, high-level tasks. However,…

Machine Learning · Computer Science 2018-03-13 Nima Dehmamy , Neda Rohani , Aggelos Katsaggelos

Point cloud based place recognition is still an open issue due to the difficulty in extracting local features from the raw 3D point cloud and generating the global descriptor, and it's even harder in the large-scale dynamic environments. In…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Zhe Liu , Shunbo Zhou , Chuanzhe Suo , Yingtian Liu , Peng Yin , Hesheng Wang , Yun-Hui Liu

Single-shot wide-angle diffraction imaging is a widely used method to investigate the structure of non-crystallizing objects such as nanoclusters, large proteins or even viruses. Its main advantage is that information about the…

Data Analysis, Statistics and Probability · Physics 2021-06-02 Thomas Stielow , Stefan Scheel

DPD-Cancer is a graph-attention deep learning framework for predicting small-molecule DPD-Cancer is a graph-attention deep learning framework for predicting small-molecule anti-cancer activity across the NCI-60 panel, trained and evaluated…

Machine Learning · Computer Science 2026-05-07 Magnus H. Strømme , Alex G. C. de Sá , David B. Ascher