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Speech foundation models (SFMs) are designed to serve as general-purpose representations for a wide range of speech-processing tasks. The last five years have seen an influx of increasingly successful self-supervised and supervised…

Computation and Language · Computer Science 2025-08-19 Ankita Pasad

Code pre-trained models (CodePTMs) have recently demonstrated a solid capacity to process various software intelligence tasks, e.g., code clone detection, code translation, and code summarization. The current mainstream method that deploys…

Software Engineering · Computer Science 2024-05-10 Qiushi Sun , Nuo Chen , Jianing Wang , Xiang Li , Ming Gao

Spoken language models (SLMs) that integrate speech with large language models (LMs) rely on modality adapters (MAs) to map the output of speech encoders to a representation that is understandable to the decoder LM. Yet we know very little…

Computation and Language · Computer Science 2025-10-20 Tolúlopé Ògúnrèmí , Christopher D. Manning , Dan Jurafsky , Karen Livescu

Underlying mechanisms of memorization in LLMs -- the verbatim reproduction of training data -- remain poorly understood. What exact part of the network decides to retrieve a token that we would consider as start of memorization sequence?…

Computation and Language · Computer Science 2026-02-04 Ilya Lasy , Peter Knees , Stefan Woltran

Sequence-to-Sequence (S2S) neural text generation models, especially the pre-trained ones (e.g., BART and T5), have exhibited compelling performance on various natural language generation tasks. However, the black-box nature of these models…

Computation and Language · Computer Science 2021-07-29 Yufei Wang , Can Xu , Huang Hu , Chongyang Tao , Stephen Wan , Mark Dras , Mark Johnson , Daxin Jiang

Protein language models (PLMs) have demonstrated remarkable success in protein modeling and design, yet their internal mechanisms for predicting structure and function remain poorly understood. Here we present a systematic approach to…

Biomolecules · Quantitative Biology 2024-12-18 Elana Simon , James Zou

The fully convolutional network (FCN) with an encoder-decoder architecture has been the standard paradigm for semantic segmentation. The encoder-decoder architecture utilizes an encoder to capture multilevel feature maps, which are…

Computer Vision and Pattern Recognition · Computer Science 2022-06-06 Libo Wang , Rui Li , Chenxi Duan , Ce Zhang , Xiaoliang Meng , Shenghui Fang

Understanding the function of individual neurons within language models is essential for mechanistic interpretability research. We propose $\textbf{Neuron to Graph (N2G)}$, a tool which takes a neuron and its dataset examples, and…

Machine Learning · Computer Science 2023-04-26 Alex Foote , Neel Nanda , Esben Kran , Ionnis Konstas , Fazl Barez

Long Short-Term Memory (LSTM) and Transformers are two popular neural architectures used for natural language processing tasks. Theoretical results show that both are Turing-complete and can represent any context-free language (CFL).In…

Computation and Language · Computer Science 2022-03-24 Hui Shi , Sicun Gao , Yuandong Tian , Xinyun Chen , Jishen Zhao

The rapid advancements in transformer-based language models have revolutionized natural language processing, yet understanding the internal mechanisms of these models remains a significant challenge. This paper explores the application of…

Machine Learning · Computer Science 2025-02-14 Edith Natalia Villegas Garcia , Alessio Ansuini

In this paper, we investigate the manner in which interpretable sub-word speech units emerge within a convolutional neural network model trained to associate raw speech waveforms with semantically related natural image scenes. We show how…

Computation and Language · Computer Science 2019-02-25 David Harwath , James Glass

The remarkable performance achieved by Large Language Models (LLM) has driven research efforts to leverage them for a wide range of tasks and input modalities. In speech-to-text (S2T) tasks, the emerging solution consists of projecting the…

Large language models (LLMs) often achieve impressive predictive accuracy, yet correctness alone does not imply genuine understanding. True LLM understanding, analogous to human expertise, requires making consistent, well-founded decisions…

Computation and Language · Computer Science 2025-11-17 Sichao Li , Xinyue Xu , Xiaomeng Li

Structural Health Monitoring (SHM) is a critical task for ensuring the safety and reliability of civil infrastructures, typically realized on bridges and viaducts by means of vibration monitoring. In this paper, we propose for the first…

In recent years, numerous Transformer-based models have been applied to long-term time-series forecasting (LTSF) tasks. However, recent studies with linear models have questioned their effectiveness, demonstrating that simple linear layers…

Machine Learning · Computer Science 2024-08-20 Jiaheng Yin , Zhengxin Shi , Jianshen Zhang , Xiaomin Lin , Yulin Huang , Yongzhi Qi , Wei Qi

Vision-language models (VLMs) are powerful but remain opaque black boxes. We introduce the first framework for transparent circuit tracing in VLMs to systematically analyze multimodal reasoning. By utilizing transcoders, attribution graphs,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Jingcheng Yang , Tianhu Xiong , Shengyi Qian , Klara Nahrstedt , Mingyuan Wu

Single-cell multi-omics data contain huge information of cellular states, and analyzing these data can reveal valuable insights into cellular heterogeneity, diseases, and biological processes. However, as cell differentiation \& development…

Genomics · Quantitative Biology 2025-08-27 Wuchao Liu , Han Peng , Wengen Li , Yichao Zhang , Jihong Guan , Shuigeng Zhou

Transformers have become the foundational architecture for a broad spectrum of sequence modeling applications, underpinning state-of-the-art systems in natural language processing, vision, and beyond. However, their theoretical limitations…

Computation and Language · Computer Science 2026-02-13 Michelle Yuan , Weiyi Sun , Amir H. Rezaeian , Jyotika Singh , Sandip Ghoshal , Yao-Ting Wang , Miguel Ballesteros , Yassine Benajiba

Understanding the internal circuits that language models use to solve tasks remains a central challenge in mechanistic interpretability. A crucial part of finding circuits is understanding why each attention head attends where it does. To…

Machine Learning · Computer Science 2026-05-15 Gabriel Franco , Lucas M. Tassis , Azalea Rohr , Mark Crovella

In this paper, we investigate the usage of autoencoders in modeling textual data. Traditional autoencoders suffer from at least two aspects: scalability with the high dimensionality of vocabulary size and dealing with task-irrelevant words.…

Machine Learning · Computer Science 2015-12-15 Shuangfei Zhai , Zhongfei Zhang