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The Cover Suffix Tree (CST) of a string $T$ is the suffix tree of $T$ with additional explicit nodes corresponding to halves of square substrings of $T$. In the CST an explicit node corresponding to a substring $C$ of $T$ is annotated with…

Data Structures and Algorithms · Computer Science 2023-08-09 Jakub Radoszewski

In the \emph{$k$-Diameter-Optimally Augmenting Tree Problem} we are given a tree $T$ of $n$ vertices as input. The tree is embedded in an unknown \emph{metric} space and we have unlimited access to an oracle that, given two distinct…

Data Structures and Algorithms · Computer Science 2023-05-30 Davide Bilò , Luciano Gualà , Stefano Leucci , Luca Pepè Sciarria

We give an O(sqrt n log n)-query quantum algorithm for evaluating size-n AND-OR formulas. Its running time is poly-logarithmically greater after efficient preprocessing. Unlike previous approaches, the algorithm is based on a quantum walk…

Quantum Physics · Physics 2011-10-11 Ben W. Reichardt

We study computational aspects of a key problem in robust statistics -- the penalized least trimmed squares (LTS) regression problem, a robust estimator that mitigates the influence of outliers in data by capping residuals with large…

Optimization and Control · Mathematics 2026-04-15 Xiang Meng , Andrés Gómez , Rahul Mazumder

Tensor networks are powerful factorization techniques which reduce resource requirements for numerically simulating principal quantum many-body systems and algorithms. The computational complexity of a tensor network simulation depends on…

Data Structures and Algorithms · Computer Science 2019-03-06 Eugene F. Dumitrescu , Allison L. Fisher , Timothy D. Goodrich , Travis S. Humble , Blair D. Sullivan , Andrew L. Wright

Large-scale simulations of time-dependent problems generate a massive amount of data and with the explosive increase in computational resources the size of the data generated by these simulations has increased significantly. This has…

Computational Engineering, Finance, and Science · Computer Science 2022-01-19 Shaghayegh Zamani Ashtiani , Mujeeb R. Malik , Hessam Babaee

When training large-scale models, the performance typically scales with the number of parameters and the dataset size according to a slow power law. A fundamental theoretical and practical question is whether comparable performance can be…

Machine Learning · Statistics 2026-03-03 Hong-Yi Wang , Di Luo , Tomaso Poggio , Isaac L. Chuang , Liu Ziyin

The string indexing problem is a fundamental computational problem with numerous applications, including information retrieval and bioinformatics. It aims to efficiently solve the pattern matching problem: given a text T of length n for…

Data Structures and Algorithms · Computer Science 2025-09-03 Waseem Akram , Takuya Mieno

The field of succinct data structures has flourished over the last 16 years. Starting from the compressed suffix array (CSA) by Grossi and Vitter (STOC 2000) and the FM-index by Ferragina and Manzini (FOCS 2000), a number of generalizations…

Data Structures and Algorithms · Computer Science 2016-09-22 Djamal Belazzougui , Fabio Cunial , Juha Kärkkäinen , Veli Mäkinen

An out-tree $T$ of a directed graph $D$ is a rooted tree subgraph with all arcs directed outwards from the root. An out-branching is a spanning out-tree. By $l(D)$ and $l_s(D)$ we denote the maximum number of leaves over all out-trees and…

Data Structures and Algorithms · Computer Science 2008-12-18 Paul Bonsma , Frederic Dorn

It is well known that modern deep neural networks are powerful enough to memorize datasets even when the labels have been randomized. Recently, Vershynin (2020) settled a long standing question by Baum (1988), proving that \emph{deep…

Machine Learning · Computer Science 2021-06-16 Shashank Rajput , Kartik Sreenivasan , Dimitris Papailiopoulos , Amin Karbasi

Cohen-Addad, Le, Pilipczuk, and Pilipczuk [CLPP23] recently constructed a stochastic embedding with expected $1+\varepsilon$ distortion of $n$-vertex planar graphs (with polynomial aspect ratio) into graphs of treewidth…

Data Structures and Algorithms · Computer Science 2024-11-04 Hsien-Chih Chang , Vincent Cohen-Addad , Jonathan Conroy , Hung Le , Marcin Pilipczuk , Michał Pilipczuk

Given a rooted, binary phylogenetic network and a rooted, binary phylogenetic tree, can the tree be embedded into the network? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic…

Populations and Evolution · Quantitative Biology 2024-02-14 Leo van Iersel , Mark Jones , Mathias Weller

We give an algebraic, determinant-based algorithm for the K-Cycle problem, i.e., the problem of finding a cycle through a set of specified elements. Our approach gives a simple FPT algorithm for the problem, matching the $O^*(2^{|K|})$…

Data Structures and Algorithms · Computer Science 2013-01-09 Magnus Wahlström

Compressed indexing is a powerful technique that enables efficient querying over data stored in compressed form, significantly reducing memory usage and often accelerating computation. While extensive progress has been made for…

Data Structures and Algorithms · Computer Science 2025-10-23 Rajat De , Dominik Kempa

We present a data structure that stores a sequence $s[1..n]$ over alphabet $[1..\sigma]$ in $n\Ho(s) + o(n)(\Ho(s){+}1)$ bits, where $\Ho(s)$ is the zero-order entropy of $s$. This structure supports the queries \access, \rank\ and \select,…

Data Structures and Algorithms · Computer Science 2012-04-03 Jeremy Barbay , Francisco Claude , Travis Gagie , Gonzalo Navarro , Yakov Nekrich

For a given graph $G$, a depth-first search (DFS) tree $T$ of $G$ is an $r$-rooted spanning tree such that every edge of $G$ is either an edge of $T$ or is between a \textit{descendant} and an \textit{ancestor} in $T$. A graph $G$ together…

Data Structures and Algorithms · Computer Science 2023-07-21 Emmanuel Sam , Benjamin Bergougnoux , Petr A. Golovach , Nello Blaser

We present a novel deep compression algorithm to reduce the memory footprint of LiDAR point clouds. Our method exploits the sparsity and structural redundancy between points to reduce the bitrate. Towards this goal, we first encode the…

Image and Video Processing · Electrical Eng. & Systems 2021-01-12 Lila Huang , Shenlong Wang , Kelvin Wong , Jerry Liu , Raquel Urtasun

The tree edit distance (TED) between two rooted ordered trees with $n$ nodes labeled from an alphabet $\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of valid operations consisting of insertions, deletions…

Data Structures and Algorithms · Computer Science 2025-04-02 Jakob Nogler , Adam Polak , Barna Saha , Virginia Vassilevska Williams , Yinzhan Xu , Christopher Ye

Countless variants of the Lempel-Ziv compression are widely used in many real-life applications. This paper is concerned with a natural modification of the classical pattern matching problem inspired by the popularity of such compression…

Data Structures and Algorithms · Computer Science 2011-04-22 Pawel Gawrychowski