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Related papers: NucEL: Single-Nucleotide ELECTRA-Style Genomic Pre…

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The performance of existing supervised neuron segmentation methods is highly dependent on the number of accurate annotations, especially when applied to large scale electron microscopy (EM) data. By extracting semantic information from…

Computer Vision and Pattern Recognition · Computer Science 2023-10-09 Yinda Chen , Wei Huang , Shenglong Zhou , Qi Chen , Zhiwei Xiong

Quantum Machine Learning (QML) offers tremendous potential but is currently limited by the availability of qubits. We introduce an innovative approach that utilizes pre-trained neural networks to enhance Variational Quantum Circuits (VQC).…

Machine Learning · Computer Science 2024-11-14 Jun Qi , Chao-Han Yang , Samuel Yen-Chi Chen , Pin-Yu Chen , Hector Zenil , Jesper Tegner

Understanding how explicit theoretical features are encoded in opaque neural systems is a central challenge now common to neuroscience and AI. We introduce Metric Learning Encoding Models (MLEMs) to address this challenge most directly as a…

Computation and Language · Computer Science 2025-11-17 Louis Jalouzot , Christophe Pallier , Emmanuel Chemla , Yair Lakretz

Large Language Models (LLMs) are discovered to suffer from accurately retrieving key information. To address this, we propose Mask-Enhanced Autoregressive Prediction (MEAP), a simple yet effective training paradigm that seamlessly…

Computation and Language · Computer Science 2026-03-16 Xialie Zhuang , Zhikai Jia , Jianjin Li , Zhenyu Zhang , Li Shen , Zheng Cao , Shiwei Liu

Background and Objective: Biomedical Named Entity Recognition (BioNER) is a foundational task in medical informatics, crucial for downstream applications like drug discovery and clinical trial matching. However, adapting general-domain…

Computation and Language · Computer Science 2025-12-30 Jian Chen , Leilei Su , Cong Sun

Click-through rate (CTR) prediction plays an important role in online advertising systems. On the one hand, traditional CTR prediction models capture the collaborative signals in tabular data via feature interaction modeling, but they lose…

Information Retrieval · Computer Science 2025-09-10 Rui Dong , Wentao Ouyang , Xiangzheng Liu

Pre-trained transformer language models (LMs) have in recent years become the dominant paradigm in applied NLP. These models have achieved state-of-the-art performance on tasks such as information extraction, question answering, sentiment…

Computation and Language · Computer Science 2025-04-14 Aidan Mannion , Thierry Chevalier , Didier Schwab , Lorraine Geouriot

Semi-supervised medical image segmentation has attracted much attention in recent years because of the high cost of medical image annotations. In this paper, we propose a novel Inherent Consistent Learning (ICL) method, aims to learn robust…

Computer Vision and Pattern Recognition · Computer Science 2023-04-19 Ye Zhu , Jie Yang , Si-Qi Liu , Ruimao Zhang

Large pre-trained language models achieve state-of-the-art results when fine-tuned on downstream NLP tasks. However, they almost exclusively focus on text-only representation, while neglecting cell-level layout information that is important…

Computation and Language · Computer Science 2021-05-25 Chenliang Li , Bin Bi , Ming Yan , Wei Wang , Songfang Huang , Fei Huang , Luo Si

This paper presents Mecellem models, a framework for developing specialized language models for the Turkish legal domain through domain adaptation strategies. We make two contributions: (1)Encoder Model Pre-trained from Scratch:…

Most of the neural networks (NNs) learned via state-of-the-art machine learning techniques are black-box models. For a widespread success of machine learning in science and engineering, it is important to develop new NN architectures to…

Machine Learning · Computer Science 2021-05-17 Gang Chen

In this paper, we introduce ELECTRA-style tasks to cross-lingual language model pre-training. Specifically, we present two pre-training tasks, namely multilingual replaced token detection, and translation replaced token detection. Besides,…

Computation and Language · Computer Science 2022-04-20 Zewen Chi , Shaohan Huang , Li Dong , Shuming Ma , Bo Zheng , Saksham Singhal , Payal Bajaj , Xia Song , Xian-Ling Mao , Heyan Huang , Furu Wei

Domain adaptation for large neural language models (NLMs) is coupled with massive amounts of unstructured data in the pretraining phase. In this study, however, we show that pretrained NLMs learn in-domain information more effectively and…

Computation and Language · Computer Science 2022-08-30 Shahriar Golchin , Mihai Surdeanu , Nazgol Tavabi , Ata Kiapour

With the advancement of Large Language Model (LLM) for natural language processing, this paper presents an intriguing finding: a frozen pre-trained LLM layer can process visual tokens for medical image segmentation tasks. Specifically, we…

Computer Vision and Pattern Recognition · Computer Science 2025-06-24 Fenghe Tang , Wenxin Ma , Zhiyang He , Xiaodong Tao , Zihang Jiang , S. Kevin Zhou

Language models, especially transformer-based ones, have achieved colossal success in NLP. To be precise, studies like BERT for NLU and works like GPT-3 for NLG are very important. If we consider DNA sequences as a text written with an…

Genomics · Quantitative Biology 2026-01-21 Musa Nuri Ihtiyar , Arzucan Ozgur

Pre-trained masked language models successfully perform few-shot learning by formulating downstream tasks as text infilling. However, as a strong alternative in full-shot settings, discriminative pre-trained models like ELECTRA do not fit…

Computation and Language · Computer Science 2022-10-28 Mengzhou Xia , Mikel Artetxe , Jingfei Du , Danqi Chen , Ves Stoyanov

Pre-trained language models (PLMs) aim to learn universal language representations by conducting self-supervised training tasks on large-scale corpora. Since PLMs capture word semantics in different contexts, the quality of word…

Computation and Language · Computer Science 2022-03-22 Wenhao Yu , Chenguang Zhu , Yuwei Fang , Donghan Yu , Shuohang Wang , Yichong Xu , Michael Zeng , Meng Jiang

Decoding the linguistic intricacies of the genome is a crucial problem in biology, and pre-trained foundational models such as DNABERT and Nucleotide Transformer have made significant strides in this area. Existing works have largely hinged…

Genomics · Quantitative Biology 2024-03-20 Zhihan Zhou , Yanrong Ji , Weijian Li , Pratik Dutta , Ramana Davuluri , Han Liu

Previous language model pre-training methods have uniformly applied a next-token prediction loss to all training tokens. Challenging this norm, we posit that "9l training". Our initial analysis examines token-level training dynamics of…

Computation and Language · Computer Science 2025-01-09 Zhenghao Lin , Zhibin Gou , Yeyun Gong , Xiao Liu , Yelong Shen , Ruochen Xu , Chen Lin , Yujiu Yang , Jian Jiao , Nan Duan , Weizhu Chen

Existing curriculum learning approaches to Neural Machine Translation (NMT) require sampling sufficient amounts of "easy" samples from training data at the early training stage. This is not always achievable for low-resource languages where…

Computation and Language · Computer Science 2021-03-23 Chen Liang , Haoming Jiang , Xiaodong Liu , Pengcheng He , Weizhu Chen , Jianfeng Gao , Tuo Zhao