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Related papers: Dissipation Pathways in a Photosynthetic Complex

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Photosynthesis is the basic process used by plants to convert light energy in reaction centers into chemical energy. The high efficiency of this process is not yet understood today. Using the formalism for the description of open quantum…

Biological Physics · Physics 2017-06-12 Hichem Eleuch , Ingrid Rotter

We explore the feasibility of coherent control of excitonic dynamics in light harvesting complexes, analyzing the limits imposed by the open nature of these quantum systems. We establish feasible targets for phase and phase/amplitude…

Non-Markovian and non-equilibrium phonon effects are believed to be key ingredients in the energy transfer in photosynthetic complexes, especially in complexes which exhibit a regime of intermediate exciton-phonon coupling. In this work, we…

Quantum Physics · Physics 2011-07-08 Patrick Rebentrost , Alán Aspuru-Guzik

To explain experimentally observed oscillatory dynamics of highly efficient process of excitation energy transfer (EET) in Fenna-Matthews-Olson (FMO) complex, most theoretical models assume the same local protein environment around all the…

Biological Physics · Physics 2018-01-26 Davinder Singh , Shubhrangshu Dasgupta

In the theory of open quantum systems, spectral densities are key quantities for modeling the dynamics and spectroscopic properties of the system under investigation. In the case of light-harvesting complexes, they encode the…

Chemical Physics · Physics 2026-04-29 Sayan Maity , Tristan A. Mauck , Ulrich Kleinekathöfer

Understanding the ultrafast vibrational relaxation following photoexcitation of molecules in a condensed phase is essential to predict the outcome and improve the efficiency of photoinduced molecular processes. Here, the vibrational…

Chemical Physics · Physics 2025-02-18 Benedikt O Birgisson , Asmus Ougaard Dohn , Hannes Jónsson , Gianluca Levi

The evaporation of water is ubiquitous in nature and industrial technologies. The known mechanism for evaporation is "thermal evaporation" which highlights the energy input for evaporation is via heat. Due to the weak absorption of water to…

Atomic and Molecular Clusters · Physics 2024-04-24 Yaodong Tu , Gang Chen

Photosystem I is a protein-pigment complex that performs photosynthesis in plants, green algae, and cyanobacteria. It contains an aggregate of chlorophylls that absorbs light and delivers the resulting electronic excitation to the special…

Biological Physics · Physics 2007-05-23 Sanghyun Park , Melih K. Sener , Deyu Lu , Klaus Schulten

The quantum network model with real variables is usually used to describe the excitation energy transfer (EET) in the Fenna-Matthews-Olson(FMO) complexes. In this paper we add the quantum phase factors to the hopping terms and find that the…

Molecular Networks · Quantitative Biology 2015-03-20 Bao-quan Ai , Shi-Liang Zhu

The dynamics of pigment-pigment and pigment-protein interactions in light-harvesting complexes is studied with a novel approach which combines molecular dynamics (MD) simulations with quantum chemistry (QC) calculations. The MD simulations…

Biological Physics · Physics 2009-11-07 Ana Damjanovic , Ioan Kosztin , Klaus Schulten

The guiding and transport of energy, for example of electromagnetic waves underpins many technologies that have shaped modern society, ranging from long distance optical fibre telecommunications to on-chip optical processors. Traditionally,…

Considering a multi-pathway structure in a light-harvesting complex of photosynthesis, we investigate the role of energy-level mismatches between antenna molecules in transferring the absorbed energy to a reaction center. We find a…

Biological Physics · Physics 2015-06-15 James Lim , Junghee Ryu , Changhyoup Lee , Seokwon Yoo , Hyunseok Jeong , Jinhyoung Lee

The process of photosynthesis, the main source of energy in the animate world, converts sunlight into chemical energy. The surprisingly high efficiency of this process is believed to be enabled by an intricate interplay between the quantum…

In natural light harvesting systems, the sequential quantum events of photon absorption by specialized biological antenna complexes, charge separation, exciton formation and energy transfer to localized reaction centers culminates in the…

Quantum Physics · Physics 2014-11-25 A. Thilagam

We present a study on the evolution of the Fenna-Matthews-Olson bacterial photosynthetic pigment-protein complex. This protein complex functions as an antenna. It transports absorbed photons - excitons - to a reaction center where…

Energy transfer between chromophores in photosynthesis proceeds with near unity quantum efficiency. Understanding the precise mechanisms of these processes is made difficult by the complexity of the electronic structure and interactions…

Chemical Physics · Physics 2015-03-03 Gethin H. Richards , Krystyna E. Wilk , Paul M. G. Curmi , Jeffrey A. Davis

Understanding the mechanisms of efficient and robust energy transfer in light-harvesting systems provides new insights for the optimal design of artificial systems. In this paper, we use the Fenna-Matthews-Olson (FMO) protein complex and…

Chemical Physics · Physics 2011-09-27 Jianlan Wu , Fan Liu , Young Shen , Jianshu Cao , Robert J. Silbey

We consider generation of an electrical pulse by an optical pulse in the ``virtual excitation'' regime. The electronic system, which is any electro-optic material including a quantum well structure biased by a dc electric field, is assumed…

Quantum Physics · Physics 2009-10-31 Akira Shimizu , Masamichi Yamanishi

Under physiological conditions, ballistic long-range transfer of electronic excitations in molecular aggregates is generally expected to be suppressed by noise and dissipative processes. Hence, quantum phenomena are not considered to be…

Mesoscale and Nanoscale Physics · Physics 2021-10-13 Andrea Mattioni , Felipe Caycedo-Soler , Susana F. Huelga , Martin B. Plenio

Natural organisms such as photosynthetic bacteria, algae, and plants employ complex molecular machinery to convert solar energy into biochemical fuel. An important common feature shared by most of these photosynthetic organisms is that they…

Biological Physics · Physics 2018-08-29 Seogjoo J. Jang , Benedetta Mennucci