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A new family of compound Poisson distribution functions from statistical linguistic is used to study the n-tuples and nucleotide composition features of DNA sequences. The relative frequency distribution of the 6-tuples and 7- tuples…

Statistical Mechanics · Physics 2007-05-23 K. L. Ng , S. P. Li

We investigate through numerical simulations the effect of selection on two summary statistics for nucleotide variation in a sample of two genes from a population of N asexually reproducing haploid individuals. One is the mean time since…

Statistical Mechanics · Physics 2009-10-31 P. R. A. Campos , M. T. Sonoda , J. F. Fontanari

We consider the Moran model of population genetics with two types, mutation, and selection, and investigate the line of descent of a randomly-sampled individual from a contemporary population. We trace this ancestral line back into the…

Probability · Mathematics 2024-05-22 Ellen Baake , Enrico Di Gaspero , Fernando Cordero

We introduce an age-structured asexual population model containing all the relevant features of evolutionary ageing theories. Beneficial as well as deleterious mutations, heredity and arbitrary fecundity are present and managed by natural…

Statistical Mechanics · Physics 2009-10-31 R. N. Onody , N. G. F. de Medeiros

In a series of recent works it has been shown that a class of simple models of evolving populations under selection leads to genealogical trees whose statistics are given by the Bolthausen-Sznitman coalescent rather than by the well known…

Disordered Systems and Neural Networks · Physics 2015-05-28 Éric Brunet , Bernard Derrida

The n-person Prisoner's Dilemma is a widely used model for populations where individuals interact in groups. The evolutionary stability of populations has been analysed in the literature for the case where mutations in the population may be…

Populations and Evolution · Quantitative Biology 2007-05-23 Anders Eriksson , Kristian Lindgren

Kingman's model describes the evolution of a one-locus haploid population of infinite size and discrete generations under the competition of selection and mutation. A random generalisation has been made in a previous paper which assumes all…

Probability · Mathematics 2020-12-01 Linglong Yuan

Large scale databases are available that contain homologous gene families constructed from hundreds of complete genome sequences from across the three domains of Life. Here we discuss approches of increasing complexity aimed at extracting…

Genomics · Quantitative Biology 2011-02-14 Gergely J Szöllősi , Vincent Daubin

Given a sample of genome sequences from an asexual population, can one predict its evolutionary future? Here we demonstrate that the branching patterns of reconstructed genealogical trees contains information about the relative fitness of…

Populations and Evolution · Quantitative Biology 2014-11-13 Richard A. Neher , Colin A. Russell , Boris I. Shraiman

It is conjectured that there is a converging sequence of some generalized Fibonacci ratios, given the difference between consecutive ratios, such as the Golden Ratio, $\varphi^1$, and the next golden ratio $\varphi^2$. Moreover, the graphic…

General Mathematics · Mathematics 2024-01-09 Arturo Ortiz Tapia

We address the question of the infinitude of twin and cousin prime pairs from a probabilistic perspective. Our approach partitions the set of integer numbers greater than $2$ in finite intervals of the form $[p_{n-1}^2,p_n^2)$, $p_{n-1}$…

Number Theory · Mathematics 2023-04-03 Daniele Bufalo , Michele Bufalo , Felice Iavernaro

We consider the evolution of populations under the joint action of mutation and differential reproduction, or selection. The population is modelled as a finite-type Markov branching process in continuous time, and the associated…

Populations and Evolution · Quantitative Biology 2009-02-23 Ellen Baake , Hans-Otto Georgii

We propose a stochastic model for evolution. Births and deaths of species occur with constant probabilities. Each new species is associated with a fitness sampled from the uniform distribution on [0,1]. Every time there is a death event…

Probability · Mathematics 2010-11-09 Herve Guiol , Fabio P. Machado , Rinaldo B. Schinazi

We study the following model for a diploid population of constant size $N$: Every individual carries a random number of (genetic) elements. Upon a reproduction event each of the two parents passes each element independently with probability…

Probability · Mathematics 2023-02-28 Peter Pfaffelhuber , Anton Wakolbinger

In exponential population growth, variability in the timing of individual division events and environmental factors (including stochastic inoculation) compound to produce variable growth trajectories. In several stochastic models of…

Populations and Evolution · Quantitative Biology 2023-12-25 Eric W. Jones , Joshua Derrick , Roger M. Nisbet , Will Ludington , David A. Sivak

In many indigenous societies, people are categorised into several cultural groups, or clans, within which they believe to share ancestors. Clan attributions provide certain rules for marriage and descent. Such rules between clans constitute…

Physics and Society · Physics 2021-12-07 Kenji Itao , Kunihiko kaneko

We study the stability of non-conservative deterministic cross diffusion models and prove that they are approximated by stochastic population models when the populations become locally large. In this model, the individuals of two species…

Analysis of PDEs · Mathematics 2025-10-09 Vincent Bansaye , Alexandre Bertolino , Ayman Moussa

We study the generalized random Fibonacci sequences defined by their first nonnegative terms and for $n\ge 1$, $F_{n+2} = \lambda F_{n+1} \pm F_{n}$ (linear case) and $\widetilde F_{n+2} = |\lambda \widetilde F_{n+1} \pm \widetilde F_{n}|$…

Probability · Mathematics 2010-03-05 Elise Janvresse , Benoît Rittaud , Thierry De La Rue

Inference with population genetic data usually treats the population pedigree as a nuisance parameter, the unobserved product of a past history of random mating. However, the history of genetic relationships in a given population is a…

Populations and Evolution · Quantitative Biology 2019-04-02 Peter L. Ralph

We investigate the nature of genetic drift acting at the leading edge of range expansions, building on recent results in [Hallatschek et al., Proc.\ Natl.\ Acad.\ Sci., \textbf{104}(50): 19926 - 19930 (2007)]. A well mixed population of two…

Populations and Evolution · Quantitative Biology 2010-08-16 Adnan Ali , Stefan Grosskinsky