English

On the structure pf genealogical trees in the presence of selection

Statistical Mechanics 2009-10-31 v1 q-bio

Abstract

We investigate through numerical simulations the effect of selection on two summary statistics for nucleotide variation in a sample of two genes from a population of N asexually reproducing haploid individuals. One is the mean time since two individuals had their most recent common ancestor (Tsˉ\bar{T_s}), and the other is the mean number of nucleotide differences between two genes in the sample (dsˉ\bar{d_s}). In the case of diminishing epistasis, in which the deleterious effect of a new mutation is attenuated, we find that the scale of dsˉ\bar{d_s} with the population size depends on the mutation rate, leading then to the onset of a sharp threshold phenomenon as N becomes large.

Keywords

Cite

@article{arxiv.cond-mat/9910520,
  title  = {On the structure pf genealogical trees in the presence of selection},
  author = {P. R. A. Campos and M. T. Sonoda and J. F. Fontanari},
  journal= {arXiv preprint arXiv:cond-mat/9910520},
  year   = {2009}
}

Comments

6 pages