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Related papers: Maximum-Entropy Model of Colored Noise in Superdif…

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Whereas Shannon entropy is related to the growth rate of multinomial coefficients, we show that the quadratic entropy (Tsallis 2-entropy) is connected to their $q$-deformation; when $q$ is a prime power, these $q$-multinomial coefficients…

Mathematical Physics · Physics 2020-03-27 Juan Pablo Vigneaux

We propose a generative framework for learning stochastic dynamics from endpoint and intermediate distributional observations. The method formulates generation as a McKean-Vlasov control problem in which terminal and time-marginal laws are…

Optimization and Control · Mathematics 2026-05-12 Samer El Boustany , Samy Mekkaoui , Yadh Hafsi , Alexandre Alouadi , Huyên Pham

Working in the framework of morphoelasticity, we develop a model of neurite growth in response to elastic deformation. We decompose the applied stretch into an elastic component and a growth component, and adopt an observationally-motivated…

Biological Physics · Physics 2019-12-13 Madeleine Anthonisen , Peter Grutter

Several experiments have demonstrated the existence of an electro-mechanical effect in many biological tissues and hydrogels, and its actual influence on growth, migration, and pattern formation. Here, to model these interactions and…

Soft Condensed Matter · Physics 2020-07-07 Yangkun Du , Yipin Su , Chaofeng Lu , Weiqiu Chen , Michel Destrade

Many phenomena in nature are described by excitable systems driven by colored noise. The temporal correlations in the fluctuations hinder an analytical treatment. We here present a general method of reduction to a white-noise system,…

Statistical Mechanics · Physics 2015-11-25 Jannis Schuecker , Markus Diesmann , Moritz Helias

In this work, we investigate the large-scale transport properties of a passive scalar advected by a turbulent fluid, modelled as a superposition of divergence-free vector fields, each weighted by an independent symmetric…

Mathematical Physics · Physics 2026-02-25 Paolo Cifani , Franco Flandoli , Lorenzo Marino

We present a comprehensive analysis of a linear growth model, which combines the characteristic features of the Edwards--Wilkinson and noisy Mullins equations. This model can be derived from microscopics and it describes the relaxation and…

Condensed Matter · Physics 2009-10-28 S. Majaniemi , T. Ala--Nissila , J. Krug

The transport properties of Brownian ratchet was studied in the presence of stochastic intensity noise (SIN) in both overdamped and underdamped regimes. In the overdamped case, analytical solution using the matrix continued fraction method…

Statistical Mechanics · Physics 2015-03-19 Yoshihiko Hasegawa , Masanori Arita

In neuroscience, synaptic plasticity refers to the set of mechanisms driving the dynamics of neuronal connections, called synapses and represented by a scalar value, the synaptic weight. A Spike-Timing Dependent Plasticity (STDP) rule is a…

Probability · Mathematics 2021-11-17 Philippe Robert , Gaetan Vignoud

Neurological studies show that injured neurons can regain their functionality with therapeutics such as Chondroitinase ABC (ChABC). These therapeutics promote axon elongation by manipulating the injured neuron and its intercellular space to…

Optimization and Control · Mathematics 2022-09-14 Cenk Demir , Shumon Koga , Miroslav Krstic

Blind source separation (BSS) is a natural framework for studying how latent causes may be recovered from sensory mixtures, but deriving online and biologically plausible algorithms for structured (i.e., constrained to known domains) and…

Machine Learning · Computer Science 2026-05-22 Bariscan Bozkurt , Efe Ali Gorguner , Francesco Innocenti , Rafal Bogacz

Observation of the Brownian motion of a small probe interacting with its environment is one of the main strategies to characterize soft matter. Essentially two counteracting forces govern the motion of the Brownian particle. First, the…

Soft Condensed Matter · Physics 2011-08-18 Thomas Franosch , Matthias Grimm , Maxim Belushkin , Flavio Mor , Giuseppe Foffi , László Forró , Sylvia Jeney

An analytical theory is presented for the damping of low-frequency adsorbate vibrations via resonant coupling to the substrate phonons. The system is treated classically, with the substrate modeled as a semi-infinite elastic continuum and…

Materials Science · Physics 2009-10-30 Steven P. Lewis , M. V. Pykhtin , E. J. Mele , Andrew M. Rappe

An overdamped system with a linear restoring force and two multiplicative colored noises is considered. Noise amplitudes depend on the system state $x$ as $x$ and $|x|^{\alpha}$. An exactly soluble model of a system is constructed due to…

Statistical Mechanics · Physics 2007-05-23 A. N. Vitrenko

In developing brain, axons and dendrites are capable of connecting to each other with high precision. Recent advances in imaging have allowed for the monitoring of axonal, dendritic, and synapse dynamics in vivo. It is observed that the…

Neurons and Cognition · Quantitative Biology 2008-04-08 Dmitry Tsigankov , Alexei Koulakov

The interplay between structure and function is crucial in determining some emerging properties of many natural systems. Here we use an adaptive neural network model inspired in observations of synaptic pruning that couples activity and…

Physics and Society · Physics 2019-04-26 Ana P. Millán , J. J. Torres , S. Johnson , J. Marro

While the ultrastructure of the myelin has been considered to be a quasi-crystalline stable system, nowadays its multiscale complex dynamics appears to play a key role for its functionality, degeneration and repair processes following…

Quantitative Methods · Quantitative Biology 2017-09-20 Michael Di Gioacchino , Gaetano Campi , Nicola Poccia , Antonio Bianconi

We present the Shannon entropy as an indicator of spatial resolution for morphology of resonance mode pattern in dielectric micro cavity. We obtain two types of optimized mesh point for the minimum and maximum sizes, respectively. The…

Quantum Physics · Physics 2019-06-24 Kyu-Won Park , SongKy Moon , JinUk Kim

Stochastic dynamical systems allow modelling of transitions induced by disturbances, in particular from an attracting equilibrium and crossing the stable manifold of a saddle. In the small-noise limit, the probability of such transitions is…

Statistical Mechanics · Physics 2025-09-05 Jiayao Shao , Tobias Grafke , Robert S. MacKay

In this paper we address some modelling issues related to biological growth. Our treatment is based on a recently-proposed, general formulation for growth within the context of Mixture Theory (Journal of the Mechanics and Physics of Solids,…

Tissues and Organs · Quantitative Biology 2011-11-09 H. Narayanan , E. M. Arruda , K. Grosh , K. Garikipati