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Image compression has been a frequent topic of presentations at ADASS. Compression is often viewed as just a technique to fit more data into a smaller space. Rather, the packing of data - its "density" - affects every facet of local data…

Instrumentation and Methods for Astrophysics · Physics 2009-10-21 Robert L. Seaman , Richard L. White , William D. Pence

Image compression is a method to remove spatial redundancy between adjacent pixels and reconstruct a high-quality image. In the past few years, deep learning has gained huge attention from the research community and produced promising image…

Image and Video Processing · Electrical Eng. & Systems 2021-09-07 Khawar Islam , L. Minh Dang , Sujin Lee , Hyeonjoon Moon

In [1], the authors proposed a new model of DNA storage system that integrates all three steps of retrieval and introduced the concept of DNA-correcting codes, which guarantees that the output of the storage system can be decoded to the…

Information Theory · Computer Science 2023-11-17 Huawei Wu

DNA-based storage offers unprecedented density and durability, but its scalability is fundamentally limited by the efficiency of parallel strand synthesis. Existing methods either allow unconstrained nucleotide additions to individual…

Information Theory · Computer Science 2025-10-27 Boaz Moav , Ryan Gabrys , Eitan Yaakobi

Despite significant advances in deepfake detection, handling varying image quality, especially due to different compressions on online social networks (OSNs), remains challenging. Current methods succeed by leveraging correlations between…

Computer Vision and Pattern Recognition · Computer Science 2024-10-25 Renshuai Tao , Manyi Le , Chuangchuang Tan , Huan Liu , Haotong Qin , Yao Zhao

DNA-based storage has emerged as a promising approach to the global data crisis, offering molecular-scale density and millennial-scale stability at low maintenance cost. Over the past decade, substantial progress has been made in storing…

Computer Vision and Pattern Recognition · Computer Science 2026-04-16 Cihan Ruan , Lebin Zhou , Bingqing Zhao , Rongduo Han , Qiming Yuan , Chenchen Zhu , Linyi Han , Liang Yang , Wei Wang , Wei Jiang , Nam Ling

We present a Compression Tool, "GenBit Compress", for genetic sequences based on our new proposed "GenBit Compress Algorithm". Our Tool achieves the best compression ratios for Entire Genome (DNA sequences) . Significantly better…

Mathematical Software · Computer Science 2010-07-15 P. Raja Rajeswari , Allam Apparo , V. K. Kumar

Minimizing data storage poses a significant challenge in large-scale metagenomic projects. In this paper, we present a new method for improving the encoding of FASTQ files generated by metagenomic sequencing. This method incorporates…

Information Theory · Computer Science 2024-01-04 Diogo Pratas , Armando J. Pinho

Emerging DNA storage technologies use composite DNA letters, where information is represented by a probability vector, leading to higher information density and lower synthesis costs. However, it faces the problem of information leakage in…

Information Theory · Computer Science 2025-04-29 Wenkai Zhang , Zhiying Wang

Entropy coding is essential to data compression, image and video coding, etc. The Range variant of Asymmetric Numeral Systems (rANS) is a modern entropy coder, featuring superior speed and compression rate. As rANS is not designed for…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-27 Fangzheng Lin , Kasidis Arunruangsirilert , Heming Sun , Jiro Katto

This paper studies two problems that are motivated by the novel recent approach of composite DNA that takes advantage of the DNA synthesis property which generates a huge number of copies for every synthesized strand. Under this paradigm,…

Information Theory · Computer Science 2025-05-15 Tomer Cohen , Eitan Yaakobi

Composite DNA is a recent method to increase the base alphabet size in DNA-based data storage.This paper models synthesizing and sequencing of composite DNA and introduces coding techniques to correct substitutions, losses of entire…

Information Theory · Computer Science 2025-10-29 Frederik Walter , Omer Sabary , Antonia Wachter-Zeh , Eitan Yaakobi

In order to overcome the limitations imposed by DNA barcoding when multiplexing a large number of samples in the current generation of high-throughput sequencing instruments, we have recently proposed a new protocol that leverages advances…

Quantitative Methods · Quantitative Biology 2013-08-02 Denisa Duma , Mary Wootters , Anna C. Gilbert , Hung Q. Ngo , Atri Rudra , Matthew Alpert , Timothy J. Close , Gianfranco Ciardo , Stefano Lonardi

Modern lens designs are capable of resolving >10 gigapixels, while advances in camera frame-rate and hyperspectral imaging have made Terapixel/s data acquisition a real possibility. The main bottlenecks preventing such high data-rate…

We propose a novel and flexible DNA-storage architecture, which divides the storage space into fixed-size units (blocks) that can be independently and efficiently accessed at random for both read and write operations, and further allows…

Emerging Technologies · Computer Science 2023-10-02 Puru Sharma , Cheng-Kai Lim , Dehui Lin , Yash Pote , Djordje Jevdjic

In this paper, we consider the outer channel for DNA-based data storage. When transmitting over the outer channel, each DNA string is treated as a unit/symbol that would be either correctly received, or erased, or corrupted by uniformly…

Information Theory · Computer Science 2025-09-23 Xuan He , Yi Ding , Kui Cai , Guanghui Song , Bin Dai , Xiaohu Tang

It has long been considered a significant problem to improve the visual quality of lossy image and video compression. Recent advances in computing power together with the availability of large training data sets has increased interest in…

Multimedia · Computer Science 2017-03-30 Aaditya Prakash , Nick Moran , Solomon Garber , Antonella DiLillo , James Storer

Modern photon science performed at high repetition rate free-electron laser (FEL) facilities and beyond relies on 2D pixel detectors operating at increasing frequencies (towards 100 kHz at LCLS-II) and producing rapidly increasing amounts…

Instrumentation and Detectors · Physics 2019-03-19 Gabriel Blaj , Chu-En Chang , Christopher J. Kenney

As deep neural networks (DNNs) have been integrated into critical systems, several methods to attack these systems have been developed. These adversarial attacks make imperceptible modifications to an image that fool DNN classifiers. We…

Computer Vision and Pattern Recognition · Computer Science 2018-03-05 Aaditya Prakash , Nick Moran , Solomon Garber , Antonella DiLillo , James Storer

Scientific applications produce vast amounts of data, posing grand challenges in the underlying data management and analytic tasks. Progressive compression is a promising way to address this problem, as it allows for on-demand data…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-02 Yanliang Li , Wenbo Li , Qian Gong , Qing Liu , Norbert Podhorszki , Scott Klasky , Xin Liang , Jieyang Chen