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DNA has been considered a promising medium for storing digital information. As an essential step in the DNA-based data storage workflow, coding algorithms are responsible to implement functions including bit-to-base transcoding, error…

Emerging Technologies · Computer Science 2023-03-31 Haoling Zhang , Zhaojun Lan , Wenwei Zhang , Xun Xu , Zhi Ping , Yiwei Zhang , Yue Shen

We study the amount of reliable information that can be stored in a DNA-based storage system with noisy sequencing, where each codeword is composed of short DNA molecules. We analyze a concatenated coding scheme, where the outer code is…

Information Theory · Computer Science 2026-05-19 Ran Tamir , Nir Weinberger , Albert Guillén i Fàbregas

Encoder-decoder networks have found widespread use in various dense prediction tasks. However, the strong reduction of spatial resolution in the encoder leads to a loss of location information as well as boundary artifacts. To address this,…

Computer Vision and Pattern Recognition · Computer Science 2020-04-01 Anne S. Wannenwetsch , Stefan Roth

Deoxyribonucleic acid (DNA) has shown great promise in enabling computational applications, most notably in the fields of DNA digital data storage and DNA computing. Information is encoded as DNA strands, which will naturally bind in…

Machine Learning · Computer Science 2021-10-22 David Buterez

Advances in deep generative and density models have shown impressive capacity to model complex probability density functions in lower-dimensional space. Also, applying such models to high-dimensional image data to model the PDF has shown…

Machine Learning · Computer Science 2019-11-13 John Just , Sambuddha Ghosal

Effective and reliable data retrieval is critical for the feasibility of DNA storage, and the development of random access efficiency plays a key role in its practicality and reliability. In this paper, we study the Random Access Problem,…

Information Theory · Computer Science 2025-10-10 Anina Gruica , Maria Montanucci , Ferdinando Zullo

We consider error-correcting coding for DNA-based storage. We model the DNA storage channel as a multi-draw IDS channel where the input data is chunked into $M$ short DNA strands, which are copied a random number of times, and the channel…

Information Theory · Computer Science 2023-06-22 Lorenz Welter , Issam Maarouf , Andreas Lenz , Antonia Wachter-Zeh , Eirik Rosnes , Alexandre Graell i Amat

In this paper, we propose a new interactive compression scheme for omnidirectional images. This requires two characteristics: efficient compression of data, to lower the storage cost, and random access ability to extract part of the…

Multimedia · Computer Science 2020-08-24 Navid Mahmoudian Bidgoli , Thomas Maugey , Aline Roumy

Storing digital data in synthetic DNA faces challenges in ensuring data reliability in the presence of edit errors--deletions, insertions, and substitutions--that occur randomly during various stages of the storage process. Current…

Information Theory · Computer Science 2025-09-11 Serge Kas Hanna

We study the amount of reliable information that can be stored in a DNA-based storage system composed of short DNA molecules. In this regime, Shomorony and Heckel (2022) put forward a conjecture on the scaling of the number of information…

Information Theory · Computer Science 2025-11-19 Ran Tamir , Nir Weinberger , Albert Guillén i Fàbregas

Recent advances in learned image codecs have been extended from human perception toward machine perception. However, progressive image compression with fine granular scalability (FGS)-which enables decoding a single bitstream at multiple…

Computer Vision and Pattern Recognition · Computer Science 2025-12-24 Jungwoo Kim , Jun-Hyuk Kim , Jong-Seok Lee

In recent decades, digital image processing has gained enormous popularity. Consequently, a number of data compression strategies have been put forth, with the goal of minimizing the amount of information required to represent images. Among…

Image and Video Processing · Electrical Eng. & Systems 2023-07-04 Suman Kunwar

Lossy image compression is a many-to-one process, thus one bitstream corresponds to multiple possible original images, especially at low bit rates. However, this nature was seldom considered in previous studies on image compression, which…

Image and Video Processing · Electrical Eng. & Systems 2021-10-01 Haichuan Ma , Dong Liu , Cunhui Dong , Li Li , Feng Wu

Deep learning accelerators efficiently train over vast and growing amounts of data, placing a newfound burden on commodity networks and storage devices. A common approach to conserve bandwidth involves resizing or compressing data prior to…

Machine Learning · Computer Science 2021-08-13 Michael Kuchnik , George Amvrosiadis , Virginia Smith

Convolutional neural networks (CNNs) have achieved astonishing advances over the past decade, defining state-of-the-art in several computer vision tasks. CNNs are capable of learning robust representations of the data directly from the RGB…

Computer Vision and Pattern Recognition · Computer Science 2023-09-26 Samuel Felipe dos Santos , Nicu Sebe , Jurandy Almeida

Convolutional neural networks (CNNs) have achieved astonishing advances over the past decade, defining state-of-the-art in several computer vision tasks. CNNs are capable of learning robust representations of the data directly from the RGB…

Computer Vision and Pattern Recognition · Computer Science 2023-09-26 Samuel Felipe dos Santos , Nicu Sebe , Jurandy Almeida

Motivation: Next Generation Sequencing technologies revolutionized many fields in biology by enabling the fast and cheap sequencing of large amounts of genomic data. The ever increasing sequencing capacities enabled by current sequencing…

Genomics · Quantitative Biology 2012-07-24 Himanshu Asnani , Dinesh Bharadia , Mainak Chowdhury , Idoia Ochoa , Itai Sharon , Tsachy Weissman

Data hiding is one widely used approach for protecting authentication and ownership. Most multimedia content like images and videos are transmitted or saved in the compressed form. This kind of lossy compression, such as JPEG, can destroy…

Image and Video Processing · Electrical Eng. & Systems 2021-01-05 Chaoning Zhang , Adil Karjauv , Philipp Benz , In So Kweon

Lossy image compression is generally formulated as a joint rate-distortion optimization to learn encoder, quantizer, and decoder. However, the quantizer is non-differentiable, and discrete entropy estimation usually is required for rate…

Computer Vision and Pattern Recognition · Computer Science 2017-09-20 Mu Li , Wangmeng Zuo , Shuhang Gu , Debin Zhao , David Zhang

We introduce RAGE, an image compression framework that achieves four generally conflicting objectives: 1) good compression for a wide variety of color images, 2) computationally efficient, fast decompression, 3) fast random access of images…

Image and Video Processing · Electrical Eng. & Systems 2024-02-12 Christian D. Rask , Daniel E. Lucani
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