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While automated experiments and high-throughput methods are becoming more mainstream in the age of data, empowering individual researchers to capture, collate, and contextualize their data faster and more reproducibly still remains a…

Computers and Society · Computer Science 2020-07-30 Ha-Kyung Kwon , Chirranjeevi Balaji Gopal , Jared Kirschner , Santiago Caicedo , Brian D. Storey

High-throughput technologies to collect field data have made observations possible at scale in several branches of life sciences. The data collected can range from the molecular level (genotypes) to physiological (phenotypic traits) and…

Computational Geometry · Computer Science 2021-07-07 Youjia Zhou , Methun Kamruzzaman , Patrick Schnable , Bala Krishnamoorthy , Ananth Kalyanaraman , Bei Wang

Characterizing quantum systems through experimental data is critical to applications as diverse as metrology and quantum computing. Analyzing this experimental data in a robust and reproducible manner is made challenging, however, by the…

Omics data facilitate the gain of novel insights into the pathophysiology of diseases and, consequently, their diagnosis, treatment, and prevention. To that end, it is necessary to integrate omics data with other data types such as…

Longitudinal omics data (LOD) analysis is essential for understanding the dynamics of biological processes and disease progression over time. This review explores various statistical and computational approaches for analyzing such data,…

Methodology · Statistics 2025-06-16 Ali R. Taheriyoun , Allen Ross , Abolfazl Safikhani , Damoon Soudbakhsh , Ali Rahnavard

The Open Dataset of Audio Quality (ODAQ) was recently introduced to address the scarcity of openly available audio datasets with corresponding subjective quality scores. The dataset, released under permissive licenses, comprises audio…

Audio and Speech Processing · Electrical Eng. & Systems 2025-04-02 Sascha Dick , Christoph Thompson , Chih-Wei Wu , Matteo Torcoli , Pablo Delgado , Phillip A. Williams , Emanuel Habets

The Intelligence Impact Quotient (IIQ) is a composite metric intended to quantify the depth to which AI systems are integrated into organizational work and their impact. Rather than treating access counts or aggregate token volume as…

Artificial Intelligence · Computer Science 2026-05-15 Chandan Rajah , Neha Sengupta , Federico Castanedo , Robin Mills , Amit Bahree , Ramesh Krishnan Muthukrishnan , Larry Murray

Multimodal systems have great potential to assist humans in procedural activities, where people follow instructions to achieve their goals. Despite diverse application scenarios, systems are typically evaluated on traditional classification…

Computation and Language · Computer Science 2025-11-05 Kimihiro Hasegawa , Wiradee Imrattanatrai , Zhi-Qi Cheng , Masaki Asada , Susan Holm , Yuran Wang , Ken Fukuda , Teruko Mitamura

Symbolic Regression (SR) holds great potential for uncovering underlying mathematical and physical relationships from observed data. However, the vast combinatorial space of possible expressions poses significant challenges for both online…

Machine Learning · Computer Science 2025-02-12 Yuan Tian , Wenqi Zhou , Michele Viscione , Hao Dong , David Kammer , Olga Fink

Symbolic Regression (SR) holds great potential for uncovering underlying mathematical and physical relationships from observed data. However, the vast combinatorial space of possible expressions poses significant challenges for both online…

Machine Learning · Computer Science 2025-02-14 Yuan Tian , Wenqi Zhou , Michele Viscione , Hao Dong , David Kammer , Olga Fink

With the rapid development of high-throughput sequencing platforms, an increasing number of omics technologies, such as genomics, metabolomics, and transcriptomics, are being applied to disease genetics research. However, biological data…

Genomics · Quantitative Biology 2024-12-18 Lei Xin , Caiyun Huang , Hao Li , Shihong Huang , Yuling Feng , Zhenglun Kong , Zicheng Liu , Siyuan Li , Chang Yu , Fei Shen , Hao Tang

A practical fault-tolerant quantum computer is worth looking forward to as it provides applications that outperform their known classical counterparts. However, millions of interacting qubits with stringent criteria are required, which is…

Quantum Physics · Physics 2021-05-31 Keren Li

We introduce isQ, a new software stack for quantum programming in an imperative programming language, also named isQ. The aim of isQ is to make the programmers write quantum programs as conveniently as possible. In particular: 1) The isQ…

Quantum Physics · Physics 2023-11-22 Jingzhe Guo , Huazhe Lou , Riling Li , Wang Fang , Junyi Liu , Peixun Long , Shenggang Ying , Mingsheng Ying

As quantum computing is becoming increasingly popular, the underlying quantum computing platforms are growing both in ability and complexity. Unfortunately, testing these platforms is challenging due to the relatively small number of…

Software Engineering · Computer Science 2023-10-17 Matteo Paltenghi , Michael Pradel

Data quality is a significant issue for any application that requests for analytics to support decision making. It becomes very important when we focus on Internet of Things (IoT) where numerous devices can interact to exchange and process…

Machine Learning · Computer Science 2020-07-30 Anna Karanika , Panagiotis Oikonomou , Kostas Kolomvatsos , Christos Anagnostopoulos

Integrated analysis of multi-omics datasets holds great promise for uncovering complex biological processes. However, the large dimension of omics data poses significant interpretability and multiple testing challenges. Simultaneous…

Methodology · Statistics 2024-10-28 Mitra Ebrahimpoor , Renee Menezes , Ningning Xu , Jelle J. Goeman

Quantum computing is being increasingly adopted for solving classically intractable problems across various domains. However, the availability of accessible and scalable software frameworks remains essential for practical experimentation…

Quantum Physics · Physics 2025-08-19 Param Pathak , K Tarakeshwar , Syed Sufiyan Ali , Shalini Devendrababu , Adarsh Ganesan

Building training-ready multi-hop question answering (QA) datasets that truly stress a model's retrieval and reasoning abilities remains highly challenging recently. While there have been a few recent evaluation datasets that capture the…

Artificial Intelligence · Computer Science 2025-11-26 Bingsen Qiu , Zijian Liu , Xiao Liu , Bingjie Wang , Feier Zhang , Yixuan Qin , Chunyan Li , Haoshen Yang , Zeren Gao

Variational Quantum Algorithms (VQAs) are promising candidates for finding practical applications of near to mid-term quantum computers. There has been an increasing effort to study the intricacies of VQAs, such as the presence or absence…

The rapid advancement of high-throughput sequencing and other assay technologies has resulted in the generation of large and complex multi-omics datasets, offering unprecedented opportunities for advancing precision medicine strategies.…

Quantitative Methods · Quantitative Biology 2025-01-30 Ana R. Baião , Zhaoxiang Cai , Rebecca C Poulos , Phillip J. Robinson , Roger R Reddel , Qing Zhong , Susana Vinga , Emanuel Gonçalves
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