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Phylogenetic trees are the primary framework for conveying evolutionary relationships. While many tools exist for visualizing phylogenetic trees, most are limited to static graphics, require coding expertise, or are developed for a specific…

Populations and Evolution · Quantitative Biology 2026-05-15 Zachary S. L. Foster , Jeff H. Chang , Niklaus J. Grunwald

It is critical to accurately simulate data when employing Monte Carlo techniques and evaluating statistical methodology. Measurements are often correlated and high dimensional in this era of big data, such as data obtained in…

For decades, the growth and volume of digital data collection has made it challenging to digest large volumes of information and extract underlying structure. Coined 'Big Data', massive amounts of information has quite often been gathered…

Human-Computer Interaction · Computer Science 2016-11-17 Andrew Moran , Vijay Gadepally , Matthew Hubbell , Jeremy Kepner

As our society is becoming increasingly data-dependent, more and more people rely on charts and graphs to understand and communicate complex data. While such visualizations effectively reveal meaningful trends, they unavoidably aggregate…

Human-Computer Interaction · Computer Science 2023-10-19 Joy Kondo , Justin Park , Josiah Kondo , Nam Wook Kim

How to extract useful insights from data is always a challenge, especially if the data is multidimensional. Often, the data can be organized according to certain hierarchical structure that are stemmed either from data collection process or…

Applications · Statistics 2016-04-21 Kun Yang , Wing Hung Wong

Smart cities are growing significantly due to the growth of smart connected vehicles and Internet of Things (IoT) where a wide range of devices are connected to share data. Online mapping is one of the fundamental services offered in smart…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-20 Fatemeh MohammadZadeh , Seyed Ali Mirghasemi , Ali Dorri , HamidReza Ahmadifar

Immersive environments have gradually become standard for visualizing and analyzing large or complex datasets that would otherwise be cumbersome, if not impossible, to explore through smaller scale computing devices. However, this type of…

Human-Computer Interaction · Computer Science 2019-03-12 Marco Cavallo , Mishal Dholakia , Matous Havlena , Kenneth Ocheltree , Mark Podlaseck

We develop multiple view visualization of higher dimensional data. Our work was chiefly motivated by the need to extract insight from four dimensional Quantum Chromodynamic (QCD) data. We develop visualization where multiple views,…

Graphics · Computer Science 2007-05-23 Stanimire Tomov , Michael McGuigan

Automated data insight mining and visualization have been widely used in various business intelligence applications (e.g., market analysis and product promotion). However, automated insight mining techniques often output the same mining…

Human-Computer Interaction · Computer Science 2025-03-11 Shangxuan Wu , Wendi Luan , Yong Wang , Dan Zeng , Qiaomu Shen , Bo Tang

We present a distributed system for storage, processing, three-dimensional visualisation and basic analysis of data from Earth-observing satellites. The database and the server have been designed for high performance and scalability,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Marek Szuba , Parinaz Ameri , Udo Grabowski , Jörg Meyer , Achim Streit

Motivation: Network visualizations of complex biological datasets usually result in 'hairball' images, which do not discriminate network modules. Results: We present the EntOptLayout Cytoscape plug-in based on a recently developed network…

Molecular Networks · Quantitative Biology 2019-11-04 Bence Agg , Andrea Csaszar , Mate Szalay-Beko , Daniel V. Veres , Reka Mizsei , Peter Ferdinandy , Peter Csermely , Istvan A. Kovacs

Autonomous driving perceives surroundings with line-of-sight sensors that are compromised under environmental uncertainties. To achieve real time global information in high definition map, we investigate to share perception information…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-12 Qiang Liu , Tao Han , Jiang , Xie , BaekGyu Kim

We introduce "TriMap"; a dimensionality reduction technique based on triplet constraints, which preserves the global structure of the data better than the other commonly used methods such as t-SNE, LargeVis, and UMAP. To quantify the global…

Machine Learning · Computer Science 2022-03-29 Ehsan Amid , Manfred K. Warmuth

Increasing quantities of scientific data are becoming readily accessible via online repositories such as those provided by Figshare and Zenodo. Geoscientific simulations in particular generate large quantities of data, with several research…

Digital Libraries · Computer Science 2016-09-22 Christian T. Jacobs , Alexandros Avdis

In this paper, we present DendroMap, a novel approach to interactively exploring large-scale image datasets for machine learning (ML). ML practitioners often explore image datasets by generating a grid of images or projecting…

Human-Computer Interaction · Computer Science 2022-08-16 Donald Bertucci , Md Montaser Hamid , Yashwanthi Anand , Anita Ruangrotsakun , Delyar Tabatabai , Melissa Perez , Minsuk Kahng

We introduce the Collection Space Navigator (CSN), a browser-based visualization tool to explore, research, and curate large collections of visual digital artifacts that are associated with multidimensional data, such as vector embeddings…

Computer Vision and Pattern Recognition · Computer Science 2025-02-14 Tillmann Ohm , Mar Canet Solà , Andres Karjus , Maximilian Schich

Linked micromaps were originally developed to display geographically indexed statistics in an intuitive way by connecting them to a sequence of small maps. The approach integrates several visualization design principles, such as small…

Applications · Statistics 2024-11-14 Randall Powers , John Eltinge , Wendy Martinez , Darcy Steeg Morris

Algorithms for laying out large graphs have seen significant progress in the past decade. However, browsing large graphs remains a challenge. Rendering thousands of graphical elements at once often results in a cluttered image, and…

Data users need relevant context and research expertise to effectively search for and identify relevant datasets. Leading data providers, such as the Inter-university Consortium for Political and Social Research (ICPSR), offer standardized…

Information Retrieval · Computer Science 2023-05-31 Lizhou Fan , Sara Lafia , Lingyao Li , Fangyuan Yang , Libby Hemphill

Objective: To (1) demonstrate the implementation of a data science platform built on open-source technology within a large, academic healthcare system and (2) describe two computational healthcare applications built on such a platform.…