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Background: Connectivity mapping is a process to recognize novel pharmacological and toxicological properties in small molecules by comparing their gene expression signatures with others in a database. A simple and robust method for…

Quantitative Methods · Quantitative Biology 2009-08-06 Shu-Dong Zhang , Timothy W. Gant

We identify two major steps in data analysis, data exploration for understanding and observing patterns/relationships in data; and construction, design and assessment of various models to formalize these relationships. For each step, there…

Parallel coordinate plots (PCPs) are among the most useful techniques for the visualization and exploration of high-dimensional data spaces. They are especially useful for the representation of correlations among the dimensions, which…

Human-Computer Interaction · Computer Science 2016-09-20 Takayuki Itoh , Ashnil Kumar , Karsten Klein , Jinman Kim

Software visualization helps to comprehend the system by providing a vivid illustration. The developers, as well as the analysts, can have a glance over the total system to understand the basic changes over time from a high-level point of…

Software Engineering · Computer Science 2021-08-16 Fazle Rabbi , Nishat Tasnim Niloy , Nadia Nahar , Md. Nurul Ahad Tawhid

Visapult is a prototype application and framework for remote visualization of large scientific datasets. We approach the technical challenges of tera-scale visualization with a unique architecture that employs high speed WANs and network…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-30 E. Wes Bethel , Brian Tierney , Jason Lee , Dan Gunther , Stephen Lau

Discovering research expertise at institutions can be a difficult task. Manually curated university directories easily become out of date and they often lack the information necessary for understanding a researcher's interests and past…

Digital Libraries · Computer Science 2020-06-12 Jon Saad-Falcon , Omar Shaikh , Zijie J. Wang , Austin P. Wright , Sasha Richardson , Duen Horng Chau

Interactive exploration of large, multidimensional datasets plays a very important role in various scientific fields. It makes it possible not only to identify important structural features and forms, such as clusters of vertices and their…

Machine Learning · Computer Science 2023-03-10 Bartosz Minch

This chapter introduces OpenStreetMap - a crowd-sourced, worldwide mapping project and geospatial data repository - to illustrate its usefulness in quickly and easily analyzing and visualizing planning and design outcomes in the built…

Physics and Society · Physics 2020-08-28 Geoff Boeing

Integrating open data sources can yield high value information but raises major problems in terms of metadata extraction, data source integration and visualization of integrated data. In this paper, we describe WebSmatch, a flexible…

Digital Libraries · Computer Science 2012-05-16 R. Coletta , E. Castanier , P. Valduriez , C. Frisch , D. Ngo , Z. Bellahsene

Maps are fundamental medium to visualize and represent the real word in a simple and 16 philosophical way. The emergence of the 3rd wave information has made a proportion of maps are available to be generated ubiquitously, which would…

Computer Vision and Pattern Recognition · Computer Science 2023-12-15 Xiran Zhou , Yi Wen , Honghao Li , Kaiyuan Li , Zhenfeng Shao , Zhigang Yan , Xiao Xie

Astronomical researchers often think of analysis and visualization as separate tasks. In the case of high-dimensional data sets, though, interactive exploratory data visualization can give far more insight than an approach where data…

Instrumentation and Methods for Astrophysics · Physics 2015-06-05 Alyssa A. Goodman

In the advent of big data era, interactive visualization of large data sets consisting of M*10^5+ high-dimensional feature vectors of length N (N ~ 10^3+), is an indispensable tool for data exploratory analysis. The state-of-the-art data…

Machine Learning · Computer Science 2019-02-05 Witold Dzwinel , Rafal Wcislo , Stan Matwin

High-throughput technologies to collect field data have made observations possible at scale in several branches of life sciences. The data collected can range from the molecular level (genotypes) to physiological (phenotypic traits) and…

Computational Geometry · Computer Science 2021-07-07 Youjia Zhou , Methun Kamruzzaman , Patrick Schnable , Bala Krishnamoorthy , Ananth Kalyanaraman , Bei Wang

Low-dimensional visualizations, or "projection maps," are widely used in scientific and creative domains to interpret large-scale and complex datasets. These visualizations not only aid in understanding existing knowledge spaces but also…

Artificial Intelligence · Computer Science 2025-05-16 Xingjian Zhang , Ziyang Xiong , Shixuan Liu , Yutong Xie , Tolga Ergen , Dongsub Shim , Hua Xu , Honglak Lee , Qiaozhu Me

We introduce HexaLab: a WebGL application for real time visualization, exploration and assessment of hexahedral meshes. HexaLab can be used by simply opening www.hexalab.net. Our visualization tool targets both users and scholars.…

Graphics · Computer Science 2019-03-18 Matteo Bracci , Marco Tarini , Nico Pietroni , Marco Livesu , Paolo Cignoni

We propose a novel end-to-end pipeline for online long-range vectorized high-definition (HD) map construction using on-board camera sensors. The vectorized representation of HD maps, employing polylines and polygons to represent map…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Jingyi Yu , Zizhao Zhang , Shengfu Xia , Jizhang Sang

Creating aesthetically pleasing data visualizations remains challenging for users without design expertise or familiarity with visualization tools. To address this gap, we present DataWink, a system that enables users to create custom…

Human-Computer Interaction · Computer Science 2025-07-24 Liwenhan Xie , Yanna Lin , Can Liu , Huamin Qu , Xinhuan Shu

A recent paper on visualizing the sensitivity of hadronic experiments to nucleon structure [1] introduces the tool PDFSense which defines measures to allow the user to judge the sensitivity of PDF fits to a given experiment. The sensitivity…

High Energy Physics - Phenomenology · Physics 2018-10-17 Dianne Cook , Ursula Laa , German Valencia

A large number of sensors deployed in recent years in various setups and their data is readily available in dedicated databases or in the cloud. Of particular interest is real-time data processing and 3D visualization in web-based user…

Signal Processing · Electrical Eng. & Systems 2019-08-27 Felix G. Hamza-Lup , Ionut E. Iacob , Sushmita Khan

Visualization of data is an important step in the understanding of data and the evaluation of statistical models. Topological Data Analysis Ball Mapper (TDABM) after Dlotko (2019), provides a model free means to visualize multivariate…

Methodology · Statistics 2025-05-14 Simon Rudkin