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The accurate quantification of left ventricular (LV) deformation/strain shows significant promise for quantitatively assessing cardiac function for use in diagnosis and therapy planning (Jasaityte et al., 2013). However, accurate estimation…

Cardiac tagging magnetic resonance imaging (t-MRI) is the gold standard for regional myocardium deformation and cardiac strain estimation. However, this technique has not been widely used in clinical diagnosis, as a result of the difficulty…

Computer Vision and Pattern Recognition · Computer Science 2021-04-20 Meng Ye , Mikael Kanski , Dong Yang , Qi Chang , Zhennan Yan , Qiaoying Huang , Leon Axel , Dimitris Metaxas

This paper presents a multimodal deep learning framework that utilizes advanced image techniques to improve the performance of clinical analysis heavily dependent on routinely acquired standard images. More specifically, we develop a joint…

Computer Vision and Pattern Recognition · Computer Science 2024-02-29 Jiarui Xing , Nian Wu , Kenneth Bilchick , Frederick Epstein , Miaomiao Zhang

Statistical shape analysis is a powerful tool to assess organ morphologies and find shape changes associated to a particular disease. However, imbalance in confounding factors, such as demographics might invalidate the analysis if not taken…

This paper aims to create a deep learning framework that can estimate the deformation vector field (DVF) for directly registering abdominal MRI-CT images. The proposed method assumed a diffeomorphic deformation. By using topology-preserved…

Computer Vision and Pattern Recognition · Computer Science 2024-05-07 Yang Lei , Luke A. Matkovic , Justin Roper , Tonghe Wang , Jun Zhou , Beth Ghavidel , Mark McDonald , Pretesh Patel , Xiaofeng Yang

Purpose: Echocardiography is commonly used as a non-invasive imaging tool in clinical practice for the assessment of cardiac function. However, delineation of the left ventricle is challenging due to the inherent properties of ultrasound…

Image and Video Processing · Electrical Eng. & Systems 2021-09-07 Deepa Krishnaswamy , Abhilash R. Hareendranathan , Tan Suwatanaviroj , Pierre Boulanger , Harald Becher , Michelle Noga , Kumaradevan Punithakumar

Tagged magnetic resonance imaging~(MRI) has been used for decades to observe and quantify the detailed motion of deforming tissue. However, this technique faces several challenges such as tag fading, large motion, long computation times,…

Image and Video Processing · Electrical Eng. & Systems 2023-05-02 Zhangxing Bian , Fangxu Xing , Jinglun Yu , Muhan Shao , Yihao Liu , Aaron Carass , Jiachen Zhuo , Jonghye Woo , Jerry L. Prince

A significant hallmark of hypertrophic cardiomyopathy (HCM) is fiber disarray, which is associated with various cardiac events such as heart failure. Quantifying fiber disarray remains critical for understanding the disease s complex…

Tissues and Organs · Quantitative Biology 2025-07-04 Mohammad Mehri , Kenneth S. Campbell , Lik Chuan Lee , Jonathan F. Wenk

As the number of patients with heart failure increases, machine learning (ML) has garnered attention in cardiomyopathy diagnosis, driven by the shortage of pathologists. However, endomyocardial biopsy specimens are often small sample size…

Machine Learning · Computer Science 2025-10-23 Masaya Mori , Yuto Omae , Yutaka Koyama , Kazuyuki Hara , Jun Toyotani , Yasuo Okumura , Hiroyuki Hao

Mesh deformation plays a pivotal role in many 3D vision tasks including dynamic simulations, rendering, and reconstruction. However, defining an efficient discrepancy between predicted and target meshes remains an open problem. A prevalent…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Tung Le , Khai Nguyen , Shanlin Sun , Kun Han , Nhat Ho , Xiaohui Xie

We present a deep learning model to automatically generate computer models of the human heart from patient imaging data with an emphasis on its capability to generate thin-walled cardiac structures. Our method works by deforming a template…

Computer Vision and Pattern Recognition · Computer Science 2024-01-05 Arjun Narayanan , Fanwei Kong , Shawn Shadden

In this paper, we present a solution for arbitrary 3D character deformation by investigating rotation angle of decomposition and preserving the mesh topology structure. In computer graphics, skeleton extraction and skeleton-driven animation…

Computer Vision and Pattern Recognition · Computer Science 2016-08-18 Hugo Martin , Raphael Fernandez , Yong Khoo

While deep learning has achieved significant advances in accuracy for medical image segmentation, its benefits for deformable image registration have so far remained limited to reduced computation times. Previous work has either focused on…

Computer Vision and Pattern Recognition · Computer Science 2018-12-06 Alessa Hering , Sven Kuckertz , Stefan Heldmann , Mattias Heinrich

Temporal volume images with 3D+t (4D) information are often used in medical imaging to statistically analyze temporal dynamics or capture disease progression. Although deep-learning-based generative models for natural images have been…

Image and Video Processing · Electrical Eng. & Systems 2022-06-28 Boah Kim , Jong Chul Ye

MOTIVATION: Left ventricular (LV) hypertrophy is a strong predictor of cardiovascular outcomes, but its genetic regulation remains largely unexplained. Conventional phenotyping relies on manual calculation of LV mass and wall thickness, but…

Temporal patterns of cardiac motion provide important information for cardiac disease diagnosis. This pattern could be obtained by three-directional CINE multi-slice left ventricular myocardial velocity mapping (3Dir MVM), which is a…

Image and Video Processing · Electrical Eng. & Systems 2021-11-02 Xiaodan Xing , Yinzhe Wu , David Firmin , Peter Gatehouse , Guang Yang

High-quality volumetric meshing from medical images is a key bottleneck for physics-based simulations in personalized medicine. For volumetric meshing of complex medical structures, recent studies have often utilized deep learning…

Image and Video Processing · Electrical Eng. & Systems 2025-06-11 Daniel H. Pak , Shubh Thaker , Kyle Baylous , Xiaoran Zhang , Danny Bluestein , James S. Duncan

Myocardial motion tracking stands as an essential clinical tool in the prevention and detection of cardiovascular diseases (CVDs), the foremost cause of death globally. However, current techniques suffer from incomplete and inaccurate…

Image and Video Processing · Electrical Eng. & Systems 2024-06-28 Chengkang Shen , Hao Zhu , You Zhou , Yu Liu , Si Yi , Lili Dong , Weipeng Zhao , David J. Brady , Xun Cao , Zhan Ma , Yi Lin

Feature tracking Cardiac Magnetic Resonance (CMR) has recently emerged as an area of interest for quantification of regional cardiac function from balanced, steady state free precession (SSFP) cine sequences. However, currently available…

Computer Vision and Pattern Recognition · Computer Science 2017-04-13 Davis M. Vigneault , Weidi Xie , David A. Bluemke , J. Alison Noble

Automatic segmentation of cardiac magnetic resonance imaging (MRI) facilitates efficient and accurate volume measurement in clinical applications. However, due to anisotropic resolution and ambiguous border (e.g., right ventricular…

Image and Video Processing · Electrical Eng. & Systems 2020-07-14 Shunjie Dong , Jinlong Zhao , Maojun Zhang , Zhengxue Shi , Jianing Deng , Yiyu Shi , Mei Tian , Cheng Zhuo