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We suggest a 3D phase field model to describe 3D cell spreading on a flat substrate. The model is a simplified version of a minimal model that was developed in [1]. Our model couples the order parameter $u$ with 3D polarization…

Biological Physics · Physics 2021-06-25 Mohammad Abu Hamed , Alexander A. Nepomnyashchy

Surface roughness plays a crucial role in the accuracy of indentation experiments used to measure the elastic properties of materials. In this study, we present a computational analysis of how surface roughness, represented explicitly by…

Computational Physics · Physics 2024-10-24 D. F. S. Costa , J. H. M Pontes , W. P. Ferreira , J. S. de Sousa , C. L. N. Oliveira

Although vacuum arcs were first identified over 110 years ago, they are not yet well understood. We have since developed a model of breakdown and gradient limits that tries to explain, in a self-consistent way: arc triggering, plasma…

Plasma Physics · Physics 2015-05-30 Zeke Insepov , Jim Norem , Seth Veitzer , Sudhakar Mahalingam

Full nucleation control for deposited functional molecules on pre-patterned surfaces is of major technological relevance. To understand the nucleation behavior we combine the numerical solution for the evolution of the adatom concentration…

Materials Science · Physics 2015-05-13 Felix Kalischewski , Andreas Heuer

Fractal geometries, characterized by self-similar patterns and non-integer dimensions, provide an intriguing platform for exploring topological phases of matter. In this work, we introduce a theoretical framework that leverages isospectral…

Mesoscale and Nanoscale Physics · Physics 2024-11-20 L. Eek , Z. F. Osseweijer , C. Morais Smith

We present a detailed systematical theoretical analysis of the post-growth processes occurring in nanofractals grown on surface. For this study we developed a method which accounts for the internal dynamics of particles in a fractal. We…

Atomic and Molecular Clusters · Physics 2015-05-18 Veronika V. Dick , Ilia A. Solov'yov , Andrey V. Solov'yov

The anisotropy of wood within the radial-tangential (RT) growth plane has a major influence on the cracking behavior perpendicular to grain. Within the scope of this work, a two-dimensional discrete element model is developed, consisting of…

Materials Science · Physics 2007-05-23 Falk K. Wittel , Gerhard Dill-Langer , Bernd-H. Kroeplin

The alignment of fibers and cells in living tissues affect their mechanical properties and functionality. In this context, one can draw an analogy between tissues and nematic liquid crystal elastomers. We explore this analogy by growing…

Soft Condensed Matter · Physics 2025-10-08 Kirsten Endresen , Aniruddh Murali , Birte Geerds , Daniel J. G. Pearce , Francesca Serra

The behaviour and fate of tissue cells is controlled by the rigidity and geometry of their adhesive environment, possibly through forces localized to sites of adhesion. We introduce a mechanical model that predicts cellular force…

Cell Behavior · Quantitative Biology 2009-07-24 Ilka B. Bischofs , Sebastian S. Schmidt , Ulrich S. Schwarz

Constancy of life vitally depends on the internalization of particles through biomembranes. Of particular interest, cellular uptake, including phagocytosis, receptor-mediated endocytosis, and membrane fusion, critically depends on the…

Soft Condensed Matter · Physics 2026-01-07 Amir Khosravanizadeh , Pierre Sens , Farshid Mohammad-Rafiee

We present a newly developed approach for the calculation of interfacial stiffness and contact area evolution between two rough bodies exhibiting self affine surface structures. Using spline assisted discretization to define localised…

Soft Condensed Matter · Physics 2021-06-04 Dorian Hanaor , Yixiang Gan , Itai Einav

Morphogenetic dynamics of tissue sheets require coordinated cell shape changes regulated by global patterning of mechanical forces. Inspired by such biological phenomena, we propose a minimal mechanochemical model based on the notion that…

Soft Condensed Matter · Physics 2021-01-01 Andrei Zakharov , Kinjal Dasbiswas

Inspired by active shape morphing in developing tissues and biomaterials, we investigate two generic mechanochemical models where the deformations of a thin elastic sheet are driven by, and in turn affect, the concentration gradients of a…

Soft Condensed Matter · Physics 2021-07-14 Andrei Zakharov , Kinjal Dasbiswas

A joint fit to neutrino-nucleon scattering and pion electroproduction data is performed to evaluate the nucleon axial form factor in the two-component model consisting of a three-quark intrinsic structure surrounded by a meson cloud.…

High Energy Physics - Phenomenology · Physics 2021-04-28 G. D. Megias , S. Bolognesi , M. B. Barbaro , E. Tomasi-Gustafsson

Nematic liquid crystals confined to geometrically as well as chemically patterned substrate on one end and a flat substrate with strong anchoring on the other is studied using non-Boltzmann Monte Carlo methods. We observe significant…

Soft Condensed Matter · Physics 2010-10-18 D. Jayasri , Regina Jose , K. P. N. Murthy , V. S. S. Sastry

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

Dynamical Systems · Mathematics 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

Many models of fractal growth patterns (like Diffusion Limited Aggregation and Dielectric Breakdown Models) combine complex geometry with randomness; this double difficulty is a stumbling block to their elucidation. In this paper we…

Statistical Mechanics · Physics 2007-05-23 Benny Davidovich , M. J. Feigenbaum , H. G. E. Hentschel , Itamar Procaccia

Intracellular protein patterns regulate many vital cellular functions, such as the processing of spatiotemporal information or the control of shape deformations. To do so, pattern-forming systems can be sensitive to the cell geometry by…

Biological Physics · Physics 2024-05-15 Tom Burkart , Benedikt J. Müller , Erwin Frey

Multi-phase materials, such as composite materials, exhibit multiple competing failure mechanisms during the growth of a macroscopic defect. For the simulation of the overall fracture process in such materials, we develop a two-phase spring…

Statistical Mechanics · Physics 2020-12-15 Rajat Pratap Singh Parihar , Dhiwakar V. Mani , Anuradha Banerjee , R. Rajesh

A general mathematical method is presented for the systematic construction of coupled map lattices (CMLs) out of deterministic cellular automata (CAs). The entire CA rule space is addressed by means of a universal map for CAs that we have…

Cellular Automata and Lattice Gases · Physics 2016-06-09 Vladimir García-Morales
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