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Pattern formation often occurs in confined systems, yet how boundaries shape patterning dynamics is unclear. We develop techniques to analyze confinement effects in nonlocal advection-diffusion equations, which generically capture the…

Pattern Formation and Solitons · Physics 2025-09-11 Jan Rombouts , Michael L Zhao , Alexander Aulehla , Anna Erzberger

The optimal use of resources has motivated the engineering community to employ controlled distribution of material within their structural designs, often relying on cellular and lattice porous structures. In this research work, a…

Materials Science · Physics 2022-07-15 A. E Gomez-Ovalle

We investigate the effect of chemically patterned surfaces on the morphology of diblock copolymers below the order-disorder transition. Profiles for lamellar phases in contact with one surface, or confined between two surfaces are obtained…

Soft Condensed Matter · Physics 2009-11-07 Yoav Tsori , David Andelman

The influence of edge roughness in angle resolved scatterometry at periodically structured surfaces is investigated. A good description of the radiation interaction with structured surfaces is crucial for the understanding of optical…

Optics · Physics 2012-09-11 A. Kato , S. Burger , F. Scholze

Cellular Automata (CA) have long been foundational in simulating dynamical systems computationally. With recent innovations, this model class has been brought into the realm of deep learning by parameterizing the CA's update rule using an…

Neural and Evolutionary Computing · Computer Science 2023-11-29 Magnus Petersen

We connect the theories of the deformation of elastic surfaces and phase surfaces arising in the description of almost periodic patterns. In particular, we show parallels between asymptotic expansions for the energy of elastic surfaces in…

Pattern Formation and Solitons · Physics 2017-05-02 Alan C. Newell , Shankar C. Venkataramani

Cells exhibit qualitatively different behaviors on substrates with different rigidities. The fact that cells are more polarized on the stiffer substrate motivates us to construct a two-dimensional cell with the distribution of focal…

Biological Physics · Physics 2017-07-26 Guangyuan Yu , Jingchen Feng , Haoran Man , Herbert Levine

Via computer simulations we study kinetics of pattern formation in a two-dimensional active matter system. Self-propulsion in our model is incorporated via the Vicsek-like activity, i.e., particles have the tendency of aligning their…

Soft Condensed Matter · Physics 2020-08-26 Saikat Chakraborty , Subir K. Das

Tree frogs are able take advantage of an interconnected network of epithelial cells in their toe pads to modulate their adhesion to surfaces under dry, wet, and flooded environments. It has been hypothesized that these interconnected…

Soft Condensed Matter · Physics 2015-02-10 Charles Dhong , Joelle Frechette

The positioning of new cellular walls during cell division plays a key role in shaping plant tissue organization. The influence of cell geometry on the positioning of division planes has been previously captured into various geometrical…

Machine Learning · Computer Science 2025-07-31 Alexandre Durrmeyer , Jean-Christophe Palauqui , Philippe Andrey

The surface pattern formation on a gelation surface is analyzed using an effective surface roughness. The spontaneous surface deformation on DiMethylAcrylAmide (DMAA) gelation surface is controlled by temperature, initiator concentration,…

Pattern Formation and Solitons · Physics 2011-02-18 T. Mizoue , M. Tokita , H. Honjo , H. J. Barraza , H. Katsuragi

Vertex models have been extensively used for simulating the evolution of multicellular systems, and have given rise to important global properties concerning their macroscopic rheology or jamming transitions. These models are based on the…

Soft Condensed Matter · Physics 2023-06-30 Ahmad K. Khan , Cécilia Olivesi , Jose J. Muñoz

The morphogenesis of cells and tissues involves an interplay between chemical signals and active forces on their surrounding surface layers. The complex interaction of hydrodynamics and material flows on such active surfaces leads to…

Cell Behavior · Quantitative Biology 2023-06-30 Sebastian Aland , Claudia Wohlgemuth

Adhesive cell-substrate interactions are crucial for cell motility and are responsible for the necessary traction that propels cells. These interactions can also change the shape of the cell, analogous to liquid droplet wetting on adhesive…

Chemical, mechanical, thermal and/or electronic properties of bulk or low-dimensional materials can be engineered by introducing structural defects to form novel functionalities. When using particles irradiation, these defects can be…

Materials Science · Physics 2022-02-07 L. Basta , A. Moscardini , S. Veronesi , F. Bianco

The effect of superimposed ac and dc electric fields on the formation of electroconvection and flexoelectric patterns in nematic liquid crystals was studied. For selected ac frequencies an extended standard model of the electro-hydrodynamic…

Soft Condensed Matter · Physics 2015-06-19 Alexei Krekhov , Werner Decker , Werner Pesch , Nandor Eber , Peter Salamon , Balazs Fekete , Agnes Buka

Several models based on the diffusion-limited aggregation (DLA) model were proposed and their scaling properties explored by computational and theoretical approaches. In this paper, we consider a new extension of the on-lattice DLA model in…

Statistical Mechanics · Physics 2009-11-10 S. C. Ferreira

The properties of two-state nearest-neighbour cellular automata (CA) that are capable of density classification are discussed. It is shown that these CA actually conserve the total density, rather than merely classifying it. This is also…

comp-gas · Physics 2007-05-23 N. Sukumar

Interactions between neighboring cells are essential for generating or refining patterns in a number of biological systems. We propose a discrete filtering approach to predict how networks of cells modulate spatially varying input signals…

Tissues and Organs · Quantitative Biology 2019-02-14 Melinda Liu Perkins , Murat Arcak

Vector-based cellular automata (CA) based on real land-parcel has become an important trend in current urban development simulation studies. Compared with raster-based and parcel-based CA models, vector CA models are difficult to be widely…

Computers and Society · Computer Science 2021-03-16 Yao Yao , Linlong Li , Zhaotang Liang , Tao Cheng , Zhenhui Sun , Peng Luo , Qingfeng Guan , Yaqian Zhai , Shihao Kou , Yuyang Cai , Lefei Li , Xinyue Ye
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