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A transition from asymmetric to symmetric patterns in time-dependent extended systems is described. It is found that one dimensional cellular automata, started from fully random initial conditions, can be forced to evolve into complex…

Cellular Automata and Lattice Gases · Physics 2007-05-23 J. R. Sanchez , R. Lopez-Ruiz

Understanding and manipulating the interactions between foreign bodies and cell membranes during endo- and phagocytosis is of paramount importance, not only for the fate of living cells but also for numerous biomedical applications. This…

Soft Condensed Matter · Physics 2023-12-06 Stijn van der Ham , Jaime Agudo-Canalejo , Hanumantha Rao Vutukuri

Vertically vibrated rod-shaped granular materials confined to quasi-2D containers self organize into distinct patterns. We find, consistent with theory and simulation, a density dependent isotropic-nematic transition. Along the walls, rods…

Soft Condensed Matter · Physics 2009-11-11 J. Galanis , D. Harries , D. L. Sackett , W. Losert , R. Nossal

The phase-field method has become in recent years the method of choice for simulating microstructural pattern formation during solidification. One of its main advantages is that time-dependent three-dimensional simulations become feasible.…

Materials Science · Physics 2007-05-23 M. Dejmek , R. Folch , A. Parisi , M. Plapp

The development of traction-force microscopy, in the past two decades, has created the unprecedented opportunity of performing direct mechanical measurements on living cells as they adhere or crawl on uniform or micro-patterned substrates.…

Biological Physics · Physics 2019-10-25 Luca Giomi

The dependent scattering mechanism is known to have a significant impact on the radiative properties of random media containing discrete scatterers. Here we theoretically demonstrate the role of dependent scattering on the radiative…

Mesoscale and Nanoscale Physics · Physics 2018-07-26 B. X. Wang , C. Y. Zhao

Multi-phase materials are key for modern engineering applications. They are generally characterized by a high strength and ductility. Many of these materials fail by ductile fracture of the, generally softer, matrix phase. In this work we…

Materials Science · Physics 2016-04-12 T. W. J. de Geus , R. H. J. Peerlings , M. G. D. Geers

The complex configurations of dynamic friction patterns-regarding real time contact areas- are transformed into appropriate networks. With this transformation of a system to network space, many properties can be inferred about the structure…

Geophysics · Physics 2014-01-03 H. O. Ghaffari , R. P. Young

Tribological phenomena are governed by combined effects of material properties, topology and surface-chemistry. We study the interplay of multiscale surface structures with molecular-scale interactions towards interpreting static frictional…

Soft Condensed Matter · Physics 2021-06-04 Dorian Hanaor , Yixiang Gan , Itai Einav

We investigate the collective motion of self-propelled agents in an environment filled with obstacles that are tethered to fixed positions via springs. The active particles are able to modify the environment by moving the obstacles through…

Mathematical Physics · Physics 2023-01-24 Pierre Degond , Angelika Manhart , Sara Merino-Aceituno , Diane Peurichard , Lorenzo Sala

This study focuses on an extended model of a standard cellular automaton (CA) that includes an extra index consisting of a radius that defines a perception area for each cell in addition to the radius defined by the CA rule. Extended…

Computational Complexity · Computer Science 2015-12-22 Yoshihiko Kayama

The results of modeling of radiation defects formation and evolution on the surface and in the volume of a crystal are presented in this article. Statistical properties are calculated for the investigated system. It is revealed that defects…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 K. S. Baktybekov , S. G. Karstina , E. N. Vertyagina

Stress distributions and the corresponding fracture patterns and evolutions in the microstructures strongly influence the load-carrying capabilities of composite structures. This work introduces an enhanced phase-field fracture model…

Computational Engineering, Finance, and Science · Computer Science 2024-11-19 Yanran Wang , Yichun Tang , Jing Du , Mike Hillman , J. S. Chen

We present a minimal continuum model of strongly adhering cells as active contractile isotropic media and use the model to study the effect of the geometry of the adhesion patch in controlling the spatial distribution of traction and…

Soft Condensed Matter · Physics 2015-06-12 Shiladitya Banerjee , M. Cristina Marchetti

A reduced model, which can fold both helix and sheet structures, is proposed to study the problem of protein folding. The goal of this model is to find an unbiased effective potential that has included the effects of water and at the same…

Soft Condensed Matter · Physics 2007-05-23 Nan-yow Chen

Young's cellular automaton, recently applied to study the spatiotemporal evolution of binary patterns for favorable/hostile environments, has now been modified from a different point of view. In this model, each differentiated cell (DC)…

Statistical Mechanics · Physics 2024-10-15 R. Piasecki , W. Olchawa , D. Fraczek

The growth of two-dimensional (2D) transition metal dichalcogenides using chemical vapor deposition has been an area of intense study, primarily due to the scalability requirements for potential device applications. One of the major…

Statistical Mechanics · Physics 2024-11-04 Gagan Kumar , Annwesha Adhikari , Anupam Roy , Sourabh Lahiri

A general approach to the design of accurate classical potentials for protein folding is described. It includes the introduction of a meaningful statistical measure of the differences between approximations of the same potential energy, the…

Biomolecules · Quantitative Biology 2009-11-13 Pablo Echenique , J. L. Alonso , Ivan Calvo

A continuum model of crack propagation is presented and discussed. We obtain steady state solutions with a self-consistently selected propagation velocity and shape of the crack, provided that elastodynamic and viscoelastic effects are…

Materials Science · Physics 2020-02-26 M. Fleck , D. Pilipenko , R. Spatschek , E. A. Brener

Active materials take advantage of their internal sources of energy to self-organize in an automated manner. This feature provides a novel opportunity to design micron-scale machines with minimal required control. However, self-organization…

Soft Condensed Matter · Physics 2021-01-22 Zijie Qu , Jialong Jiang , Heun Jin Lee , Rob Phillips , Shahriar Shadkhoo , Matt Thomson