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Single-particle cryo-electron microscopy (cryo-EM) has become one of the mainstream structural biology techniques because of its ability to determine high-resolution structures of dynamic bio-molecules. However, cryo-EM data acquisition…

Machine Learning · Computer Science 2022-04-18 Quanfu Fan , Yilai Li , Yuguang Yao , John Cohn , Sijia Liu , Seychelle M. Vos , Michael A. Cianfrocco

We present 3DeepCT, a deep neural network for computed tomography, which performs 3D reconstruction of scattering volumes from multi-view images. Our architecture is dictated by the stationary nature of atmospheric cloud fields. The task of…

Image and Video Processing · Electrical Eng. & Systems 2020-12-14 Yael Sde-Chen , Yoav Y. Schechner , Vadim Holodovsky , Eshkol Eytan

Time-resolved high-resolution X-ray Computed Tomography (4D $\mu$CT) is an imaging technique that offers insight into the evolution of dynamic processes inside materials that are opaque to visible light. Conventional tomographic…

Image and Video Processing · Electrical Eng. & Systems 2026-01-12 Wannes Goethals , Tom Bultreys , Steffen Berg , Matthieu N. Boone , Jan Aelterman

The widespread usage of high-definition screens on edge devices stimulates a strong demand for efficient image restoration algorithms. The way of caching deep learning models in a look-up table (LUT) is recently introduced to respond to…

Computer Vision and Pattern Recognition · Computer Science 2024-05-28 Jiacheng Li , Chang Chen , Zhen Cheng , Zhiwei Xiong

Assume you encounter an inverse problem that shall be solved for a large number of data, but no ground-truth data is available. To emulate this encounter, in this study, we assume it is unknown how to solve the imaging problem of Computed…

Single-particle cryo-electron microscopy (cryo-EM) has recently joined X-ray crystallography and NMR spectroscopy as a high-resolution structural method to resolve biological macromolecules. In a cryo-EM experiment, the microscope produces…

Information Theory · Computer Science 2022-10-28 Tamir Bendory , Nicolas Boumal , William Leeb , Eitan Levin , Amit Singer

Deep image prior (DIP) was recently introduced as an effective unsupervised approach for image restoration tasks. DIP represents the image to be recovered as the output of a deep convolutional neural network, and learns the network's…

Image and Video Processing · Electrical Eng. & Systems 2023-02-10 Riccardo Barbano , Johannes Leuschner , Maximilian Schmidt , Alexander Denker , Andreas Hauptmann , Peter Maaß , Bangti Jin

Segmentation of curvilinear structures is important in many applications, such as retinal blood vessel segmentation for early detection of vessel diseases and pavement crack segmentation for road condition evaluation and maintenance.…

Image and Video Processing · Electrical Eng. & Systems 2022-04-06 Tianyi Shi , Nicolas Boutry , Yongchao Xu , Thierry Géraud

Dual-energy computed tomography (DECT) enables material-specific imaging through acquisitions at two different X-ray energy spectra. Material decomposition from DECT data is an ill-posed inverse problem that is highly sensitive to noise…

Deep learning based computed tomography (CT) reconstruction has demonstrated outstanding performance on simulated 2D low-dose CT data. This applies in particular to domain adapted neural networks, which incorporate a handcrafted physics…

Image and Video Processing · Electrical Eng. & Systems 2023-11-30 Jevgenija Rudzusika , Buda Bajić , Thomas Koehler , Ozan Öktem

Cryo-electron microscopy (cryo-EM) has recently emerged as a powerful tool for obtaining three-dimensional (3D) structures of biological macromolecules in native states. A minimum cryo-EM image data set for deriving a meaningful…

Applications · Statistics 2014-04-28 Ting-Li Chen , Dai-Ni Hsieh , Hung Hung , I-Ping Tu , Pei-Shien Wu , Yi-Ming Wu , Wei-Hau Chang , Su-Yun Huang

3D reconstruction from single view images is an ill-posed problem. Inferring the hidden regions from self-occluded images is both challenging and ambiguous. We propose a two-pronged approach to address these issues. To better incorporate…

Computer Vision and Pattern Recognition · Computer Science 2019-03-27 Priyanka Mandikal , K L Navaneet , Mayank Agarwal , R. Venkatesh Babu

The two-dimensional nature of mammography makes estimation of the overall breast density challenging, and estimation of the true patient-specific radiation dose impossible. Digital breast tomosynthesis (DBT), a pseudo-3D technique, is now…

In recent years, an abundance of new molecular structures have been elucidated using cryo-electron microscopy (cryo-EM), largely due to advances in hardware technology and data processing techniques. Owing to these new exciting…

Information Theory · Computer Science 2020-04-22 Tamir Bendory , Alberto Bartesaghi , Amit Singer

The mathematical problem for Electrical Impedance Tomography (EIT) is a highly nonlinear ill-posed inverse problem requiring carefully designed reconstruction procedures to ensure reliable image generation. D-bar methods are based on a…

Numerical Analysis · Mathematics 2018-05-09 Sarah Jane Hamilton , Andreas Hauptmann

Atom segmentation and localization, noise reduction and deblurring of atomic-resolution scanning transmission electron microscopy (STEM) images with high precision and robustness is a challenging task. Although several conventional…

Materials Science · Physics 2021-02-23 Ruoqian Lin , Rui Zhang , Chunyang Wang , Xiao-Qing Yang , Huolin L. Xin

Foundation models in computer vision have demonstrated exceptional performance in zero-shot and few-shot tasks by extracting multi-purpose features from large-scale datasets through self-supervised pre-training methods. However, these…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Yingjun Shen , Haizhao Dai , Qihe Chen , Yan Zeng , Jiakai Zhang , Yuan Pei , Jingyi Yu

Electron tomography (ET) plays an important role in the three-dimensional (3D) characterization of nanomaterials. However, under limited-angle and sparse-view conditions, conventional algorithms produce degraded reconstructions, which…

Image and Video Processing · Electrical Eng. & Systems 2026-05-27 Serge Brosset , Daniel del Pozo Bueno , Thomas David , Laure Guetaz , Philippe Ciuciu , Zineb Saghi

Electrical Impedance Tomography (EIT) is a powerful imaging modality widely used in medical diagnostics, industrial monitoring, and environmental studies. The EIT inverse problem is about inferring the internal conductivity distribution of…

Image and Video Processing · Electrical Eng. & Systems 2025-08-11 Alexander Denker , Fabio Margotti , Jianfeng Ning , Kim Knudsen , Derick Nganyu Tanyu , Bangti Jin , Andreas Hauptmann , Peter Maass

The proliferation of edge devices has unlocked unprecedented opportunities for deep learning model deployment in computer vision applications. However, these complex models require considerable power, memory and compute resources that are…

Machine Learning · Computer Science 2023-09-21 Saad Ashfaq , Alexander Hoffman , Saptarshi Mitra , Sudhakar Sah , MohammadHossein AskariHemmat , Ehsan Saboori
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