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Applications which use human speech as an input require a speech interface with high recognition accuracy. The words or phrases in the recognised text are annotated with a machine-understandable meaning and linked to knowledge graphs for…

Human-Computer Interaction · Computer Science 2017-05-26 Ashwini Jaya Kumar , Sören Auer , Christoph Schmidt , Joachim köhler

This paper introduces Data2Neo, an open-source Python library for converting relational data into knowledge graphs stored in Neo4j databases. With extensive customization options and support for continuous online data integration from…

Databases · Computer Science 2024-06-13 Julian Minder , Laurence Brandenberger , Luis Salamanca , Frank Schweitzer

LLM-empowered multi-agent systems offer new potential to accelerate scientific discovery by generating novel research ideas. However, existing methods typically coordinate agents through temporary texts, such as drafts or chat logs; it is…

Multiagent Systems · Computer Science 2026-05-07 Jiangwen Dong , Bo Li , Wanyu Lin

Human-AI interaction researchers face an overwhelming challenge: synthesizing insights from thousands of empirical studies to understand how AI impacts people and inform effective design. Existing approach for literature reviews cluster…

Human-Computer Interaction · Computer Science 2025-10-01 Chayapatr Archiwaranguprok , Awu Chen , Sheer Karny , Hiroshi Ishii , Pattie Maes , Pat Pataranutaporn

We present here a browser-based application for visualizing patterns of connectivity in 3D stacked data matrices with large numbers of pairwise relations. Visualizing a connectivity matrix, looking for trends and patterns, and dynamically…

Neurons and Cognition · Quantitative Biology 2018-01-04 David J. Caldwell , Jing Wu , Kaitlyn Casimo , Jeffrey G. Ojemann , Rajesh P. N. Rao

Knowledge Graphs, such as Wikidata, comprise structural and textual knowledge in order to represent knowledge. For each of the two modalities dedicated approaches for graph embedding and language models learn patterns that allow for…

Computation and Language · Computer Science 2023-08-21 Mojtaba Nayyeri , Zihao Wang , Mst. Mahfuja Akter , Mirza Mohtashim Alam , Md Rashad Al Hasan Rony , Jens Lehmann , Steffen Staab

Entity synonyms discovery is crucial for entity-leveraging applications. However, existing studies suffer from several critical issues: (1) the input mentions may be out-of-vocabulary (OOV) and may come from a different semantic space of…

Artificial Intelligence · Computer Science 2021-04-02 Yiying Yang , Xi Yin , Haiqin Yang , Xingjian Fei , Hao Peng , Kaijie Zhou , Kunfeng Lai , Jianping Shen

Knowledge transfer among multiple networks using their outputs or intermediate activations have evolved through extensive manual design from a simple teacher-student approach (knowledge distillation) to a bidirectional cohort one (deep…

Computer Vision and Pattern Recognition · Computer Science 2019-12-18 Soma Minami , Tsubasa Hirakawa , Takayoshi Yamashita , Hironobu Fujiyoshi

In today's data-driven world, the ability to extract meaningful information from data is becoming essential for businesses, organizations and researchers alike. For that purpose, a wide range of tools and systems exist addressing…

Machine Learning · Computer Science 2026-03-24 Gerard Pons , Besim Bilalli , Anna Queralt

In recent years, there has been substantial progress in using pretrained Language Models (LMs) on a range of tasks aimed at improving the understanding of biomedical texts. Nonetheless, existing biomedical LLMs show limited comprehension of…

Computation and Language · Computer Science 2025-09-10 Andrey Sakhovskiy , Elena Tutubalina

Biomedical knowledge graphs (KGs) hold rich information on entities such as diseases, drugs, and genes. Predicting missing links in these graphs can boost many important applications, such as drug design and repurposing. Recent work has…

Computation and Language · Computer Science 2021-09-22 Rahul Nadkarni , David Wadden , Iz Beltagy , Noah A. Smith , Hannaneh Hajishirzi , Tom Hope

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Published biomedical information has and continues to rapidly increase. The recent advancements in Natural Language Processing (NLP), have generated considerable interest in automating the extraction, normalization, and representation of…

Computation and Language · Computer Science 2024-04-24 Armando D. Diaz Gonzalez , Kevin S. Hughes , Songhui Yue , Sean T. Hayes

Large language models (LLMs) have recently soared in popularity due to their ease of access and the unprecedented ability to synthesize text responses to diverse user questions. However, LLMs like ChatGPT present significant limitations in…

Human-Computer Interaction · Computer Science 2023-08-08 Peiling Jiang , Jude Rayan , Steven P. Dow , Haijun Xia

Automated data visualization plays a crucial role in simplifying data interpretation, enhancing decision-making, and improving efficiency. While large language models (LLMs) have shown promise in generating visualizations from natural…

Computation and Language · Computer Science 2025-07-29 Mizanur Rahman , Md Tahmid Rahman Laskar , Shafiq Joty , Enamul Hoque

Large language models (LLMs) offer new opportunities for constructing knowledge graphs (KGs) from unstructured clinical narratives. However, existing approaches often rely on structured inputs and lack robust validation of factual accuracy…

Artificial Intelligence · Computer Science 2026-01-06 Udiptaman Das , Krishnasai B. Atmakuri , Duy Ho , Chi Lee , Yugyung Lee

Benefiting from the powerful expressive capability of graphs, graph-based approaches have been popularly applied to handle multi-modal medical data and achieved impressive performance in various biomedical applications. For disease…

Machine Learning · Computer Science 2022-03-14 Shuai Zheng , Zhenfeng Zhu , Zhizhe Liu , Zhenyu Guo , Yang Liu , Yuchen Yang , Yao Zhao

Knowledge graphs (KGs) are gaining prominence in Healthcare AI, especially in drug discovery and pharmaceutical research as they provide a structured way to integrate diverse information sources, enhancing AI system interpretability. This…

Artificial Intelligence · Computer Science 2023-09-29 Satvik Garg , Shivam Parikh , Somya Garg

Knowledge Graphs (KGs) are increasingly used to represent and explore complex, interconnected data across diverse domains. However, existing KG visualization systems remain limited because they fail to provide the context of user questions.…

Human-Computer Interaction · Computer Science 2026-04-14 Rumali Perera , Xiaoqi Wang , Han-wei Shen

The global shortage and uneven distribution of medical expertise continue to hinder equitable access to accurate diagnostic care. While existing intelligent diagnostic system have shown promise, most struggle with dual-user interaction, and…

Human-Computer Interaction · Computer Science 2026-01-29 Zihan Zhou , Yinan Liu , Yuyang Xie , Bin Wang , Xiaochun Yang , Zezheng Feng