Related papers: Relative knot probabilities in confined lattice po…
The concordance genus of a knot K is the minimum three-genus among all knots concordant to K. For prime knots of 10 or fewer crossings there have been three knots for which the concordance genus was unknown. Those three cases are now…
This paper focuses on the graphs in the Petersen family, the set of minor minimal intrinsically linked graphs. We prove there is a relationship between algebraic linking of an embedding and knotting in an embedding. We also present a more…
The tube model is a central concept in polymer physics, and allows to reduce the complex many-filament problem of an entangled polymer solution to a single filament description. We investigate the probability distribution function of…
Knots in open strands such as ropes, fibers, and polymers, cannot typically be described in the language of knot theory, which characterizes only closed curves in space. Simulations of open knotted polymer chains, often parameterized to…
We model the typical behavior of knots and links using grid diagrams. Links are ubiquitous in the sciences, and their "normal" or "typical" behavior is of significant importance in understanding situations such as the topological state of…
We demonstrate a variant of the Bond Fluctuation lattice Monte Carlo model in which moves through cis conformations are forbidden. Ring polymers in this model have a conserved quantity that amounts to a topological linking number. Increased…
It is nontrivial whether the average size of a ring polymer should become smaller or larger under a topological constraint. Making use of some knot invariants, we evaluate numerically the mean square radius of gyration for ring polymers…
Links of singularity and generalized algebraic links are ways of constructing three-manifolds and smooth links inside them from potentially singular complex algebraic surfaces and complex curves inside them. We prove that knot lattice…
We have evaluated by numerical simulation the average size $R_K$ of random polygons of fixed knot topology $K = \emptyset, 3_1, 3_1\sharp4_1$, and we have confirmed the scaling law $R^2_K \sim N^{2\nu_K}$ for the number $N$ of polygonal…
A knot theory for two-dimensional square lattice is proposed, which sheds light on design of new two-dimensional material with high topological numbers. We consider a two-band model, focusing on the Hall conductance {\sigma}xy = e^2/hbar*P,…
Given a set C in R^d, let p(C) be the probability that a random d-dimensional unimodular lattice, chosen according to Haar measure on SL(d,Z)\SL(d,R), is disjoint from C\{0}. For special convex sets C we prove bounds on p(C) which are sharp…
In "Width complexes for knots and 3-manifolds," Jennifer Schultens defines the width complex for a knot in order to understand the different positions a knot can occupy in the 3-sphere and the isotopies between these positions. She poses…
A polymer folding model on the square lattice is constructed with attractive contact interactions of strength 1/c^2, 0<c<1. The corresponding model on a dynamical random lattice, with freely fluctuating co-ordination number at each vertex,…
We present an analysis for the ring closure probability of semiflexible polymers within the pure bend Worm Like Chain (WLC) model. The ring closure probability predicted from our analysis can be tested against fluorescent actin cyclization…
The relaxation of a single knotted ring polymer is studied by Brownian dynamics simulations. The relaxation rate lambda_q for the wave number q is estimated by the least square fit of the equilibrium time-displaced correlation function to a…
This survey explores knot polynomials and their categorification, culminating in the homological invariants of knots. We begin with an overview of classical knot polynomials, progressing towards the superpolynomial and its role in unifying…
In this paper, the Kelvin wave and knot dynamics are studied on three dimensional smoothly deformed entangled vortex-membranes in five dimensional space. Owing to the existence of local Lorentz invariance and diffeomorphism invariance, in…
We study the effects of a power-law trapping potential on the scaling behaviour of the entanglement at the quantum critical point of one-dimensional (1D) lattice particle systems. We compute bipartite von Neumann and Renyi entropies in the…
Knotted vortices such as those produced in water by Kleckner and Irvine tend to transform by reconnection to collections of unknotted and unlinked circles. The reconnection number $R(K)$ of an oriented knot of link $K$ is the least number…
We study the interplay between entropy and topological constraints for a polymer chain in which sliding rings (slip-links) enforce pair contacts between monomers. These slip-links divide a closed ring polymer into a number of sub-loops…