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Real-space refinement of atomic models in macromolecular crystallography or in cryo electron microscopy fits a model to a map obtained experimentally. This requires generating model maps of a limited resolution which moreover may vary from…

Computational Engineering, Finance, and Science · Computer Science 2022-06-22 Ludmila Urzhumtseva , Vladimir Y. Lunin , Alexandre Urzhumtsev

We prove a novel method for the embedding of a 3-fold rotationally symmetric sphere-type mesh onto a subset of the plane with 3-fold rotational symmetry. The embedding is free-boundary with the only additional constraint on the image set is…

Computational Geometry · Computer Science 2024-06-12 Tom Gilat , Ben Gilat

This paper serves as our first effort to develop a new triangular spectral element method (TSEM) on unstructured meshes, using the rectangle-triangle mapping proposed in the conference note [21]. Here, we provide some new insights into the…

Numerical Analysis · Mathematics 2012-04-24 Michael Daniel Samson , Huiyuan Li , Li-Lian Wang

We present a first-principles derivation of spatial atomic-sublevel decoherence near dielectric and metallic surfaces. The theory is based on the electromagnetic-field quantization in absorbing dielectric media. We derive an expression for…

Quantum Physics · Physics 2007-05-23 R. Fermani , S. Scheel , P. L. Knight

In this work we propose a nonconvex two-stage \underline{s}tochastic \underline{a}lternating \underline{m}inimizing (SAM) method for sparse phase retrieval. The proposed algorithm is guaranteed to have an exact recovery from $O(s\log n)$…

Numerical Analysis · Mathematics 2022-11-23 Jian-Feng Cai , Yuling Jiao , Xiliang Lu , Juntao You

Simulated annealing (SA) is a kind of relaxation method for finding equilibria of Hamiltonian systems. A set of evolution equations is solved with SA, which is derived from the original Hamiltonian system so that the energy of the system…

Plasma Physics · Physics 2022-10-19 M. Furukawa , P. J. Morrison

Sharpness-aware minimization (SAM) encourages flat minima by perturbing parameters along directions of high loss curvature, but treats all parameter directions uniformly, ignoring the underlying loss geometry. We introduce LLQR+SAM, which…

Machine Learning · Computer Science 2026-05-18 Simon Dufort-Labbé , Mehrab Hamidi , Razvan Pascanu , Ioannis Mitliagkas , Damien Scieur , Aristide Baratin

Analysing two-dimensional shallow water equations with idealised bottom topographies have many applications in the atmospheric and oceanic sciences; however, restrictive flow pattern assumptions have been made to achieve explicit solutions.…

Fluid Dynamics · Physics 2023-05-01 Chang Liu , Antwan D. Clark

The scaled boundary finite element method (SBFEM) has recently been employed as an efficient means to model three-dimensional structures, in particular when the geometry is provided as a voxel-based image. To this end, an octree…

Numerical Analysis · Mathematics 2023-10-31 Hauke Gravenkamp , Albert A. Saputra , Sascha Eisenträger

The volumetric stretch energy has been widely applied to the computation of volume-/mass-preserving parameterizations of simply connected tetrahedral mesh models. However, this approach still lacks theoretical support. In this paper, we…

Numerical Analysis · Mathematics 2022-10-19 Tsung-Ming Huang , Wei-Hung Liao , Wen-Wei Lin , Mei-Heng Yueh , Shing-Tung Yau

In this paper, we propose and analyze semi-implicit numerical schemes for the stochastic wave equation (SWE) with general nonlinearity and multiplicative noise. These numerical schemes, called stochastic scalar auxiliary variable (SAV)…

Numerical Analysis · Mathematics 2022-08-30 Jianbo Cui , Jialin Hong , Liying Sun

Surface parameterization plays a fundamental role in many science and engineering problems. In particular, as genus-0 closed surfaces are topologically equivalent to a sphere, many spherical parameterization methods have been developed over…

Computational Geometry · Computer Science 2024-03-27 Gary P. T. Choi

We present an efficient approach of Finite Element Method (FEM)-based nonrigid image registration, in which the spatial transformation is constructed using truncated hierarchical B-splines (THB-splines). The image registration framework…

Numerical Analysis · Mathematics 2017-03-20 Aishwarya Pawar , Yongjie Zhanga , Yue Jia , Xiaodong Wei , Timon Rabczuk , Chiu Ling Chan , Cosmin Anitescu

The spherical nature of the wavefronts exhibited in the near-field of antenna arrays enables advanced beamforming capabilities, such as beampointing and beamnulling. In this paper, we exploit these properties to design a near-field beam…

Signal Processing · Electrical Eng. & Systems 2026-02-16 Laurence Defraigne , Gilles Monnoyer , Jérôme Louveaux , Luc Vandendorpe

Solid-state dewetting (SSD), a widespread phenomenon in solid-solid-vapor system, could be used to describe the accumulation of solid thin films on the substrate. In this work, we consider the sharp interface model for axisymmetric SSD with…

Numerical Analysis · Mathematics 2024-05-28 Meng Li , Chunjie Zhou

In this paper, the generalized finite element method (GFEM) for solving second order elliptic equations with rough coefficients is studied. New optimal local approximation spaces for GFEMs based on local eigenvalue problems involving a…

Numerical Analysis · Mathematics 2021-12-22 Chupeng Ma , Robert Scheichl , Tim Dodwell

Sharpness-Aware Minimization (SAM) is an optimization technique designed to improve generalization by favoring flatter loss minima. To achieve this, SAM optimizes a modified objective that penalizes sharpness, using computationally…

Machine Learning · Computer Science 2024-11-05 Nalin Tiwary , Siddarth Aananth

In shape optimisation it is desirable to obtain deformations of a given mesh without negative impact on the mesh quality. We propose a new algorithm using least square formulations of the Cauchy-Riemann equations. Our method allows to…

Optimization and Control · Mathematics 2021-06-09 José A. Iglesias , Kevin Sturm , Florian Wechsung

Sparse autoencoders (SAEs) are used to analyze embeddings, but their role and practical value are debated. We propose a new perspective on SAEs by demonstrating that they can be naturally understood as topic models. We propose a continuous…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Leander Girrbach , Zeynep Akata

The Spherical Geometry Algorithm (SGA) demonstrates superior capability in achieving efficient and precise spaceborne SAR image formation processing, even under challenging imaging conditions including non-linear radar trajectories and…

Signal Processing · Electrical Eng. & Systems 2025-06-11 Xinhua Mao , Manyi Tao , Jixia Fan
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