Related papers: A Method to Generate Multi-interval Pairwise Compa…
A graph $G$ is a pairwise compatibility graph (PCG) if there exists an edge-weighted tree and an interval $I$, such that each leaf of the tree is a vertex of the graph, and there is an edge $\{ x, y \}$ in $G$ if and only if the weight of…
A graph G is a multi-interval PCG if there exist an edge weighted tree T with non-negative real values and disjoint intervals of the non-negative real half-line such that each node of G is uniquely associated to a leaf of T and there is an…
A graph $G=(V,E)$ with a vertex set $V$ and an edge set $E$ is called a pairwise compatibility graph (PCG, for short) if there are a tree $T$ whose leaf set is $V$, a non-negative edge weight $w$ in $T$, and two non-negative reals…
Pairwise compatibility graphs (PCGs) with non-negative integer edge weights recently have been used to describe rare evolutionary events and scenarios with horizontal gene transfer. Here we consider the case that vertices are separated by…
A graph $G$ is called a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $l_u$ of $T$ corresponds to a vertex $u \in V$ and there is…
A graph $G=(V,E)$ is called a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $u$ of $T$ corresponds to a vertex $u \in V$ and there…
Pairwise Compatibility Graphs (PCGs) form a tree-metric graph class that originated in phylogeny and has since attracted sustained interest in graph theory. Several natural generalizations have been proposed in order to overcome the…
A graph $G$ is called a pairwise compatibility graph (PCG) if there exists an edge weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$ such that each leaf $l_u$ of $T$ corresponds to a vertex $u \in V$ and there is…
A graph $G$ is called a pairwise compatibility graph (PCG, for short) if it admits a tuple $(T,w, d_{\min},d_{\max})$ of a tree $T$ whose leaf set is equal to the vertex set of $G$, a non-negative edge weight $w$, and two non-negative reals…
A graph $G=(V,E)$ is a pairwise compatibility graph (PCG) if there exists an edge-weighted tree $T$ and two non-negative real numbers $d_{min}$ and $d_{max}$, $d_{min} \leq d_{max}$, such that each node $u \in V$ is uniquely associated to a…
A graph G=(V,E) is a pairwise compatibility graph (PCG) if there exists an edge-weighted tree T and two non-negative real numbers `d' and `D' such that each leaf `u' of T is a node of V and the edge `(u,v) belongs to E' iff `d <= d_T(u, v)…
The enumeration of chemical graphs is an important topic in cheminformatics and bioinformatics, particularly in the discovery of novel drugs. These graphs are typically either tree-like multigraphs or composed of tree-like multigraphs…
The interval graph for a set of intervals on a line consists of one vertex for each interval, and an edge for each intersecting pair of intervals. A probe interval graph is a variant that is motivated by an application to genomics, where…
A graph is reconstructible if it is determined up to isomorphism by the multiset of its proper induced subgraphs. The reconstruction conjecture postulates that every graph of order at least 3 is reconstructible. We show that interval graphs…
It is known that any chordal graph on $n$ vertices can be represented as the intersection of $n$ subtrees in a tree on $n$ nodes. This fact is recently used in [2] to generate random chordal graphs on $n$ vertices by generating $n$ subtrees…
Interactions between two entities often occur at specific timestamps, which can be modeled as a temporal graph. Exploring the relationships between vertices based on temporal paths is one of the fundamental tasks. In this paper, we conduct…
Probabilistic dependency graphs (PDGs) are a flexible class of probabilistic graphical models, subsuming Bayesian Networks and Factor Graphs. They can also capture inconsistent beliefs, and provide a way of measuring the degree of this…
Models of complex networks are generally defined as graph stochastic processes in which edges and vertices are added or deleted over time to simulate the evolution of networks. Here, we define a unifying framework - probabilistic inductive…
Chordal graphs form one of the most studied graph classes. Several graph problems that are NP-hard in general become solvable in polynomial time on chordal graphs, whereas many others remain NP-hard. For a large group of problems among the…
Threshold graphs are recursive deterministic network models that have been proposed for describing certain economic and social interactions. One drawback of this graph family is that it has limited generative attachment rules. To mitigate…