Characterizing Star-PCGs
Abstract
A graph is called a pairwise compatibility graph (PCG, for short) if it admits a tuple of a tree whose leaf set is equal to the vertex set of , a non-negative edge weight , and two non-negative reals such that has an edge between two vertices if and only if the distance between the two leaves and in the weighted tree is in the interval . The tree is also called a witness tree of the PCG . The problem of testing if a given graph is a PCG is not known to be NP-hard yet. To obtain a complete characterization of PCGs is a wide open problem in computational biology and graph theory. In literature, most witness trees admitted by known PCGs are stars and caterpillars. In this paper, we give a complete characterization for a graph to be a star-PCG (a PCG that admits a star as its witness tree), which provides us the first polynomial-time algorithm for recognizing star-PCGs.
Cite
@article{arxiv.1804.02895,
title = {Characterizing Star-PCGs},
author = {Mingyu Xiao and Hiroshi Nagamochi},
journal= {arXiv preprint arXiv:1804.02895},
year = {2020}
}
Comments
24 pages and 5 figures