Related papers: Decoding MIE: A Novel Dataset Approach Using Topic…
Bibliographic analysis considers the author's research areas, the citation network and the paper content among other things. In this paper, we combine these three in a topic model that produces a bibliographic model of authors, topics and…
Artificial intelligence has provided us with an exploration of a whole new research era. As more data and better computational power become available, the approach is being implemented in various fields. The demand for it in health…
The human brain represents an object by small elements and distinguishes two objects based on the difference in elements. Discovering the distinctive elements of high-dimensional datasets is therefore critical in numerous perception-driven…
Natural language processing techniques are being applied to increasingly diverse types of electronic health records, and can benefit from in-depth understanding of the distinguishing characteristics of medical document types. We present a…
Extracting structured and grounded fact triples from raw text is a fundamental task in Information Extraction (IE). Existing IE datasets are typically collected from Wikipedia articles, using hyperlinks to link entities to the Wikidata…
Assessing journal impact is central to scholarly communication, yet existing open resources rarely capture how collaboration structures and artificial intelligence (AI) research jointly shape venue prestige in biomedicine. We present…
Biomedical Event Extraction (BEE) is a challenging task that involves modeling complex relationships between fine-grained entities in biomedical text. BEE has traditionally been formulated as a classification problem. With recent…
This article presents our steps to integrate complex and partly unstructured medical data into a clinical research database with subsequent decision support. Our main application is an integrated faceted search tool, accompanied by the…
Citation parsing is fundamental for search engines within academia and the protection of intellectual property. Meticulous extraction is further needed when evaluating the similarity of documents and calculating their citation impact.…
Information extraction (IE) from documents is an intensive area of research with a large set of industrial applications. Current state-of-the-art methods focus on scanned documents with approaches combining computer vision, natural language…
We analyzed Medical Subject Headings (MeSH) from 21.6 million research articles indexed by PubMed to map this vast space of entities and their relations, providing insights into the origins and future of biomedical convergence. Detailed…
The discovery of new materials has a documented history of propelling human progress for centuries and more. The behaviour of a material is a function of its composition, structure, and properties, which further depend on its processing and…
Neural network representation learning frameworks have recently shown to be highly effective at a wide range of tasks ranging from radiography interpretation via data-driven diagnostics to clinical decision support. This often superior…
The Medical Information Mart for Intensive Care (MIMIC) datasets have become the Kernel of Digital Health Research by providing freely accessible, deidentified records from tens of thousands of critical care admissions, enabling a broad…
A number of journal classification systems have been developed in bibliometrics since the launch of the Citation Indices by the Institute of Scientific Information (ISI) in the 1960s. These systems are used to normalize citation counts with…
Information extraction from semi-structured documents is crucial for frictionless business-to-business (B2B) communication. While machine learning problems related to Document Information Extraction (IE) have been studied for decades, many…
Event extraction has gained considerable interest due to its wide-ranging applications. However, recent studies draw attention to evaluation issues, suggesting that reported scores may not accurately reflect the true performance. In this…
Context: The Debian system has historically participated in academic works and scientific projects, with well-known examples including NeuroDebian, Debian Med, Debsources, Debian Science, and Debian GIS, where the scientific relevance of…
Document-level event extraction (DEE) faces two main challenges: arguments-scattering and multi-event. Although previous methods attempt to address these challenges, they overlook the interference of event-unrelated sentences during event…
A ubiquitous task in processing electronic medical data is the assignment of standardized codes representing diagnoses and/or procedures to free-text documents such as medical reports. This is a difficult natural language processing task…