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Open Information Extraction (OIE) is the task of the unsupervised creation of structured information from text. OIE is often used as a starting point for a number of downstream tasks including knowledge base construction, relation…
The rapid growth of scientific literature has made manual extraction of structured knowledge increasingly impractical. To address this challenge, we introduce SCILIRE, a system for creating datasets from scientific literature. SCILIRE has…
We introduce RealKIE, a benchmark of five challenging datasets aimed at advancing key information extraction methods, with an emphasis on enterprise applications. The datasets include a diverse range of documents including SEC S1 Filings,…
The explosive growth of AI and machine learning literature -- with venues like NeurIPS and ICLR now accepting thousands of papers annually -- has made comprehensive citation coverage increasingly difficult for researchers. While citation…
Background: In the information extraction and natural language processing domain, accessible datasets are crucial to reproduce and compare results. Publicly available implementations and tools can serve as benchmark and facilitate the…
Artificial Intelligence (AI) has the potential to revolutionize diagnosis and segmentation in medical imaging. However, development and clinical implementation face multiple challenges including limited data availability, lack of…
The task of Information Extraction (IE) involves automatically converting unstructured textual content into structured data. Most research in this field concentrates on extracting all facts or a specific set of relationships from documents.…
Objectives: Despite the recent adoption of large language models (LLMs) for biomedical information extraction, challenges in prompt engineering and algorithms persist, with no dedicated software available. To address this, we developed…
High-quality biomedical datasets are essential for medical research and disease treatment innovation. The NIH-funded Bridge2AI project strives to facilitate such innovations by uniting top-tier, diverse teams to curate datasets designed for…
Event extraction for the clinical domain is an under-explored research area. The lack of training data along with the high volume of domain-specific terminologies with vague entity boundaries makes the task especially challenging. In this…
This paper explores the structure of research papers in software engineering. Using text mining, we study 35,391 software engineering (SE) papers from 34 leading SE venues over the last 25 years. These venues were divided, nearly evenly,…
The medical imaging literature has witnessed remarkable progress in high-performing segmentation models based on convolutional neural networks. Despite the new performance highs, the recent advanced segmentation models still require large,…
Acquiring medical expertise is a critical component of medical education and professional development. While existing studies focus primarily on constructing medical knowledge bases or developing learning tools based on the structured,…
Eye-tracking-while-reading corpora are a valuable resource for many different disciplines and use cases. Use cases range from studying the cognitive processes underlying reading to machine-learning-based applications, such as gaze-based…
Publications are an integral part in a scientific community. Bibliographic reference extraction from scientific publication is a challenging task due to diversity in referencing styles and document layout. Existing methods perform…
Background Concept extraction, a subdomain of natural language processing (NLP) with a focus on extracting concepts of interest, has been adopted to computationally extract clinical information from text for a wide range of applications…
Investigative Journalism (IJ, in short) is staple of modern, democratic societies. IJ often necessitates working with large, dynamic sets of heterogeneous, schema-less data sources, which can be structured, semi-structured, or textual,…
Open Information Extraction (OpenIE) aims to extract structured relational tuples (subject, relation, object) from sentences and plays critical roles for many downstream NLP applications. Existing solutions perform extraction at sentence…
Semantic segmentation of medical images aims to associate a pixel with a label in a medical image without human initialization. The success of semantic segmentation algorithms is contingent on the availability of high-quality imaging data…
Data intensive research requires the support of appropriate datasets. However, it is often time-consuming to discover usable datasets matching a specific research topic. We formulate the dataset discovery problem on an attributed…