Discovering distinctive elements of biomedical datasets for high-performance exploration
Abstract
The human brain represents an object by small elements and distinguishes two objects based on the difference in elements. Discovering the distinctive elements of high-dimensional datasets is therefore critical in numerous perception-driven biomedical and clinical studies. However, currently there is no available method for reliable extraction of distinctive elements of high-dimensional biomedical and clinical datasets. Here we present an unsupervised deep learning technique namely distinctive element analysis (DEA), which extracts the distinctive data elements using high-dimensional correlative information of the datasets. DEA at first computes a large number of distinctive parts of the data, then filters and condenses the parts into DEA elements by employing a unique kernel-driven triple-optimization network. DEA has been found to improve the accuracy by up to 45% in comparison to the traditional techniques in applications such as disease detection from medical images, gene ranking and cell recognition from single cell RNA sequence (scRNA-seq) datasets. Moreover, DEA allows user-guided manipulation of the intermediate calculation process and thus offers intermediate results with better interpretability.
Cite
@article{arxiv.2410.05436,
title = {Discovering distinctive elements of biomedical datasets for high-performance exploration},
author = {Md Tauhidul Islam and Lei Xing},
journal= {arXiv preprint arXiv:2410.05436},
year = {2024}
}
Comments
13 pages, 5 figures