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Between-species coevolution, and in particular antagonistic host-parasite coevolution, is a major process shaping within-species diversity. In this paper we investigate the role of various stochastic processes affecting the outcome of the…

Populations and Evolution · Quantitative Biology 2020-12-08 Wolfgang Stephan , Aurélien Tellier

The "Kill the Winner" hypothesis is an attempt to address the problem of diversity in biology. It argues that host-specific predators control the population of each prey, preventing a winner from emerging and thus maintaining the…

Biological Physics · Physics 2018-01-03 Chi Xue , Nigel Goldenfeld

We study distributed agreement in microbial distributed systems under stochastic population dynamics and competitive interactions. Motivated by recent applications in synthetic biology, we examine how the presence and absence of direct…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-10 Victoria Andaur , Janna Burman , Matthias Függer , Manish Kushwaha , Bilal Manssouri , Thomas Nowak , Joel Rybicki

Mechanisms leading to speciation are a major focus in evolutionary biology. In this paper, we present and study a stochastic model of population where individuals, with type a or A, are equivalent from ecological, demographical and spatial…

Populations and Evolution · Quantitative Biology 2017-04-20 Camille Coron , Manon Costa , Hélène Leman , Charline Smadi

We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when…

Populations and Evolution · Quantitative Biology 2025-03-20 Christian Hamster , Jorik Schaap , Peter van Heijster , Joshua Dijksman

Phenotypic plasticity and its evolution may help evolutionary rescue in a novel and stressful environment, especially if environmental novelty reveals cryptic genetic variation that enables the evolution of increased plasticity. However,…

Populations and Evolution · Quantitative Biology 2016-09-23 Jaime Ashander , Luis-Miguel Chevin , Marissa L. Baskett

Game theory ideas provide a useful framework for studying evolutionary dynamics in a well-mixed environment. This approach, however, typically enforces a strictly fixed overall population size, deemphasizing natural growth processes. We…

Populations and Evolution · Quantitative Biology 2016-08-30 Thiparat Chotibut , David R. Nelson

This paper introduces a stochastic adaptive dynamics model for the interplay of several crucial traits and mechanisms in bacterial evolution, namely dormancy, horizontal gene transfer (HGT), mutation and competition. In particular, it…

Probability · Mathematics 2023-01-27 Jochen Blath , Tobias Paul , András Tóbiás

Life-history tradeoffs among species are major drivers of community assembly. Most studies investigate how tradeoffs promote deterministic coexistence of species. It remains unclear how tradeoffs may instead promote historically contingent…

Populations and Evolution · Quantitative Biology 2021-03-09 Niv DeMalach , Nadav Shnerb , Tadashi Fukami

Evolutionary game theory has traditionally employed deterministic models to describe population dynamics. These models, due to their inherent nonlinearities, can exhibit deterministic chaos, where population fluctuations follow complex,…

Populations and Evolution · Quantitative Biology 2025-04-02 Maria Alejandra Ramirez , George Datseris , Arne Traulsen

We use dynamical generating functionals to study the stability and size of communities evolving in Lotka-Volterra systems with random interaction coefficients. The size of the eco-system is not set from the beginning. Instead, we start from…

Populations and Evolution · Quantitative Biology 2018-10-17 Tobias Galla

We are interested in modeling the Darwinian evolution resulting from the interplay of phenotypic variation and natural selection through ecological interactions, in the specific scales of the biological framework of adaptive dynamics.…

Probability · Mathematics 2013-02-05 Nicolas Champagnat , Pierre-Emmanuel Jabin , Sylvie Méléard

Competition between parasitoids can reduce the success of pest control in biological programs using two species as bio-control agents or when multiple species exploit the same host crop. Parasitoid foraging behavior and the ability to…

Populations and Evolution · Quantitative Biology 2023-11-01 Idemauro Antonio Rodrigues de Lara , Gabriel Rodrigues Palma , Victor José Bon , Carolina Reigada , Rafael de Andrade Moral

Quantitative predictions about the processes that promote species coexistence are a subject of active research in ecology. In particular, competitive interactions are known to shape and maintain ecological communities, and situations where…

Populations and Evolution · Quantitative Biology 2020-01-22 Jose A. Capitan , Sara Cuenda , David Alonso

Individuals within any species exhibit differences in size, developmental state, or spatial location. These differences coupled with environmental fluctuations in demographic rates can have subtle effects on population persistence and…

Populations and Evolution · Quantitative Biology 2015-12-16 Gregory Roth , Sebastian J. Schreiber

Classical understanding of the outcome of the struggle for existence results in the Darwinian survival of the fittest. Here we show that the situation may be different, more complex and arguably more interesting. Specifically, we show that…

Populations and Evolution · Quantitative Biology 2018-12-10 Georgy Karev , Faina Berezovskaya

In biology and ecology, individuals or communities of individuals living in unpredictable environments often alternate between different evolutionary strategies to spread and reduce risks. Such behavior is commonly referred to as…

Populations and Evolution · Quantitative Biology 2015-03-11 Jorge Hidalgo , Simone Pigolotti , Miguel A. Munoz

Organisms and ecological groups accumulate evidence to make decisions. Classic experiments and theoretical studies have explored this process when the correct choice is fixed during each trial. However, we live in a constantly changing…

Neurons and Cognition · Quantitative Biology 2015-10-01 Alan Veliz-Cuba , Zachary P. Kilpatrick , Kresimir Josic

We introduce and analyse an individual-based evolutionary model, in which a population of genetically diverse organisms compete with each other for limited resources. Through theoretical analysis and stochastic simulations, we show that the…

Populations and Evolution · Quantitative Biology 2012-11-02 Tim Rogers , Alan J. McKane , Axel G. Rossberg

Studies about epidemic modelling have been conducted since before 19th century. Both deterministic and stochastiic model were used to capture the dynamic of infection in the population. The purpose of this project is to investigate the…

Populations and Evolution · Quantitative Biology 2018-03-06 Kurnia Susvitasari