Related papers: An Efficient Algorithm for Group Testing with Runl…
We study the generalized Chv\'atal-Sankoff constant $\gamma_{k,d}$, which represents the normalized expected length of the longest common subsequence (LCS) of $d$ independent uniformly random strings over an alphabet of size $k$. We derive…
Sublinear time quantum algorithms have been established for many fundamental problems on strings. This work demonstrates that new, faster quantum algorithms can be designed when the string is highly compressible. We focus on two popular and…
We consider a version of the classical group testing problem motivated by PCR testing for COVID-19. In the so-called tropical group testing model, the outcome of a test is the lowest cycle threshold (Ct) level of the individuals pooled…
We present a new optimization method for the group selection problem in linear regression. In this problem, predictors are assumed to have a natural group structure and the goal is to select a small set of groups that best fits the…
Among the challenges that the COVID-19 pandemic outbreak revealed is the problem to reduce the number of tests required for identifying the virus carriers in order to contain the viral spread while preserving the tests reliability. To cope…
Group testing is the process of pooling arbitrary subsets from a set of $n$ items so as to identify, with a minimal number of tests, a "small" subset of $d$ defective items. In "classical" non-adaptive group testing, it is known that when…
We consider two closely related problems of text indexing in a sub-linear working space. The first problem is the Sparse Suffix Tree (SST) construction of a set of suffixes $B$ using only $O(|B|)$ words of space. The second problem is the…
Recently, it was discovered by several authors that a $q$-ary optimal locally recoverable code, i.e., a locally recoverable code archiving the Singleton-type bound, can have length much bigger than $q+1$. This is quite different from the…
We study the general integer programming problem where the number of variables $n$ is a variable part of the input. We consider two natural parameters of the constraint matrix $A$: its numeric measure $a$ and its sparsity measure $d$. We…
The edit distance of two strings is the minimum number of insertions, deletions, and substitutions of characters needed to transform one string into the other. The textbook dynamic-programming algorithm computes the edit distance of two…
We construct efficient, unconditional non-malleable codes that are secure against tampering functions computed by small-depth circuits. For constant-depth circuits of polynomial size (i.e. $\mathsf{AC^0}$ tampering functions), our codes…
We improve the Solovay--Kitaev theorem and algorithm for a general finite, inverse-closed generating set acting on a qudit. Prior versions of the algorithm efficiently find a word of length $O(n^{3+\delta})$ to approximate an arbitrary…
Kim et al. (2021) gave a method to embed a given binary $[n,k]$ code $\mathcal{C}$ $(k = 3, 4)$ into a self-orthogonal code of the shortest length which has the same dimension $k$ and minimum distance $d' \ge d(\mathcal{C})$. We extend this…
We consider the classical makespan minimization scheduling problem where $n$ jobs must be scheduled on $m$ identical machines. Using weighted random sampling, we developed two sublinear time approximation schemes: one for the case where $n$…
We study a design framework for robust, independently verifiable, and workload-balanced distributed algorithms working on a common input. An algorithm based on the framework is essentially a distributed encoding procedure for a…
We study the tradeoffs between the locality and parameters of subsystem codes. We prove lower bounds on both the number and lengths of interactions in any $D$-dimensional embedding of a subsystem code. Specifically, we show that any…
Let $A_q(n,d)$ be the maximum order (maximum number of codewords) of a $q$-ary code of length $n$ and Hamming distance at least $d$. And let $A(n,d,w)$ that of a binary code of constant weight $w$. Building on results from algebraic graph…
As an important coding scheme in modern distributed storage systems, locally repairable codes (LRCs) have attracted a lot of attentions from perspectives of both practical applications and theoretical research. As a major topic in the…
The Lopsided Lov\'{a}sz Local Lemma (LLLL) is a powerful probabilistic principle which has been used in a variety of combinatorial constructions. While originally a general statement about probability spaces, it has recently been…
We present algorithms for length-constrained maximum sum segment and maximum density segment problems, in particular, and the problem of finding length-constrained heaviest segments, in general, for a sequence of real numbers. Given a…