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Since a spatial distribution of communication requests is inhomogeneous and related to a population, in constructing a network, it is crucial for delivering packets on short paths through the links between proximity nodes and for…

Physics and Society · Physics 2012-07-31 Yukio Hayashi

Empirical data on real complex systems are becoming increasingly available. Parallel to this is the need for new methods of reconstructing (inferring) the topology of networks from time-resolved observations of their node-dynamics. The…

Dynamical Systems · Mathematics 2019-09-16 Marc G. Leguia , Zoran Levnajic , Ljupco Todorovski , Bernard Zenko

In this paper we investigate networks whose evolution is governed by the interaction of a random assembly process and an optimization process. In the first process, new nodes are added one at a time and form connections to randomly selected…

Disordered Systems and Neural Networks · Physics 2011-05-16 Markus Brede

Rapidly mutating pathogens may be able to persist in the population and reach an endemic equilibrium by escaping hosts' acquired immunity. For such diseases, multiple biological, environmental and population-level mechanisms determine the…

Physics and Society · Physics 2019-02-07 Alberto Aleta , Andreia N. S. Hisi , Sandro Meloni , Chiara Poletto , Vittoria Colizza , Yamir Moreno

Common gastropods such as snails crawl on a solid substrate by propagating muscular waves of shear stress on a viscoelastic mucus. Producing the mucus accounts for the largest component in the gastropod's energy budget, more than twenty…

Soft Condensed Matter · Physics 2008-10-02 Eric Lauga , A. E. Hosoi

The dynamical mechanisms that can stabilize the coexistence of species (or strategies) are of substantial interest for the maintenance of biodiversity and in sociobehavioural dynamics. We investigate the mean extinction time in the…

Populations and Evolution · Quantitative Biology 2010-03-16 Markus Schütt , Jens Christian Claussen

We investigate a tritrophic system in which organisms' energy depletion, resulting from failed selection attempts, leads to a partial loss of capacity to win the cyclic spatial game. The energy required to maintain optimal organism fitness…

Populations and Evolution · Quantitative Biology 2024-06-05 J. Menezes , E. Rangel

Unravelling current complex food systems is relevant for their adjustment and redesign under the current changing climate conditions. Redesign may be necessitated by migration of people and changes of locations of major agri-food…

Physics and Society · Physics 2026-04-15 Erik van der Linden , Marcel Meinders , Egbert H. van Nes , Hugo de Vries

Multi-strain competition on networks is observed in many contexts, including infectious disease ecology, information dissemination or behavioral adaptation to epidemics. Despite a substantial body of research has been developed considering…

In this study, we synthesize a novel dynamical approach for ant colonies enabling them to migrate to new nest sites in a self-organizing fashion. In other words, we realize ant colony migration as a self-organizing phenotype-level…

Robotics · Computer Science 2022-10-11 Matin Macktoobian

We study a simple model of a foraging animal that modifies the substrate on which it moves. This substrate provides its only resource, and the forager manage it by taking a limited portion at each visited site. The resource recovers its…

Populations and Evolution · Quantitative Biology 2016-11-23 Laila Daniela Kazimierski , Guillermo Abramson , Marcelo Néstor Kuperman

Mutualisms are key for structuring ecological communities, but they are sensitive to environmental change and fluctuations in population size. Consequently, how mutualisms achieve stability remains an open question in ecological theory.…

Populations and Evolution · Quantitative Biology 2026-05-08 Matheus Bongestab , David Pinto-Ramos , Ricardo Martinez-Garcia

The Physarum network expands or retracts in response to environmental stimuli, demonstrating an intelligent adaptive capability to locate optimal paths for nutrient transport. The underlying physical mechanism governing this intelligence…

Biological Physics · Physics 2026-02-03 Bingyang Han , Luolan Chen , Tieyan Si

Search processes in the natural world are often punctuated by home returns that reset the position of foraging animals, birds, and insects. Many theoretical, numerical, and experimental studies have now demonstrated that this strategy can…

To find out the role of the wiring cost in the organization of the neural network of the nematode \textit{Caenorhapditis elegans} (\textit{C. elegans}), we build the neuronal map of \textit{C. elegans} based on geometrical positions of…

Neurons and Cognition · Quantitative Biology 2009-11-11 Yong-Yeol Ahn , Beom Jun Kim , Hawoong Jeong

The interaction between natural selection and random mutation is frequently debated in recent years. Does similar dilemma also exist in the evolution of real networks such as biological networks? In this paper, we try to discuss this issue…

Statistical Mechanics · Physics 2009-01-07 Zhen Shao , Hai-jun Zhou

For years, a main focus of ecological research has been to better understand the complex dynamical interactions between species which comprise food webs. Using the connectance properties of a widely explored synthetic food web called the…

Populations and Evolution · Quantitative Biology 2024-10-16 Sepideh Vafaie , Deepak Bal , Michael A. S. Thorne , Eric Forgoston

Abrupt changes in behavior can often be associated with changes in underlying behavioral states. When placed off food, the foraging behavior of C. elegans can be described as a change between an initial local-search behavior characterized…

Neurons and Cognition · Quantitative Biology 2025-06-03 Andrew Margolis , Andrew Gordus

Network science investigates the architecture of complex systems to understand their functional and dynamical properties. Structural patterns such as communities shape diffusive processes on networks. However, these results hold under the…

Physics and Society · Physics 2015-06-26 Jean-Charles Delvenne , Renaud Lambiotte , Luis E. C. Rocha

We consider the dynamics of spatially-distributed, diffusing populations of organisms with antagonistic interactions. These interactions are found on many length scales, ranging from kilometer-scale animal range dynamics with selection…

Populations and Evolution · Quantitative Biology 2019-10-25 Maxim O. Lavrentovich , David R. Nelson