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Force-directed layouts belong to a popular class of methods used to position nodes in a node-link diagram. However, they typically lack direct consideration of global structures, which can result in visual clutter and the overlap of…

Human-Computer Interaction · Computer Science 2022-08-16 Bhavana Doppalapudi , Bei Wang , Paul Rosen

TDA (topological data analysis) is a relatively new area of research related to importing classical ideas from topology into the realm of data analysis. Under the umbrella term TDA, there falls, in particular, the notion of persistent…

Algebraic Topology · Mathematics 2019-06-03 Facundo Memoli , Kritika Singhal

Persistent Homology (PH) is a useful tool to study the underlying structure of a data set. Persistence Diagrams (PDs), which are 2D multisets of points, are a concise summary of the information found by studying the PH of a data set.…

Computational Geometry · Computer Science 2020-11-24 Megan Johnson , Jae-Hun Jung

A topos theoretic generalisation of the category of sets allows for modelling spaces which vary according to time intervals. Persistent homology, or more generally, persistence is a central tool in topological data analysis, which examines…

Rings and Algebras · Mathematics 2015-06-23 João Pita Costa , Mikael Vejdemo Johansson , Primož Škraba

Symmetry is ubiquitous throughout nature and can often give great insights into the formation, structure and stability of objects studied by mathematicians, physicists, chemists and biologists. However, perfect symmetry occurs rarely so…

Algebraic Topology · Mathematics 2023-08-21 Nicholas Bermingham , Vanessa Robins , Katharine Turner

A deformed differential calculus is developed based on an associative star-product. In two dimensions the Hamiltonian vector fields model the algebra of pseudo-differential operator, as used in the theory of integrable systems. Thus one…

High Energy Physics - Theory · Physics 2020-12-16 I. A. B. Strachan

Recently, bipath persistent homology has been proposed as an extension of standard persistent homology, along with its visualization (bipath persistence diagram) and computational methods. In the setting of standard persistent homology, the…

Algebraic Topology · Mathematics 2025-03-04 Shunsuke Tada

A central problem in data-driven scientific inquiry is how to interpret structure in noisy, high-dimensional data. Topological data analysis (TDA) provides a solution via persistent homology, which encodes features of interest as…

Algebraic Topology · Mathematics 2026-02-04 Christian Lentz , Gregory Henselman-Petrusek , Lori Ziegelmeier

This monograph introduces key concepts and problems in the new research area of Periodic Geometry and Topology for materials applications.Periodic structures such as solid crystalline materials or textiles were previously classified in…

Computational Geometry · Computer Science 2021-06-10 Olga Anosova , Vitaliy Kurlin

Persistent homology is a central methodology in topological data analysis that has been successfully implemented in many fields and is becoming increasingly popular and relevant. The output of persistent homology is a persistence diagram --…

Statistics Theory · Mathematics 2024-04-24 Konstantin Häberle , Barbara Bravi , Anthea Monod

Based on Morse theory for the energy functional on path spaces we develop a deformation theory for mapping spaces of spheres into orthogonal groups. This is used to show that these mapping spaces are weakly homotopy equivalent, in a stable…

Algebraic Topology · Mathematics 2021-04-14 Jost-Hinrich Eschenburg , Bernhard Hanke

Mixing, and coherence are fundamental issues at the heart of understanding transport in fluid dynamics and other non-autonomous dynamical systems. Recently, the notion of coherence has come to a more rigorous footing, and particularly…

Dynamical Systems · Mathematics 2014-05-07 Tian Ma , Erik Bollt

In persistent homology analysis, interval modules play a central role in describing the birth and death of topological features across a filtration. In this work, we extend this setting, and propose the use of bipath persistent homology,…

Algebraic Topology · Mathematics 2024-04-04 Toshitaka Aoki , Emerson G. Escolar , Shunsuke Tada

In this paper, we present a novel deep method to reconstruct a point cloud of an object from a single still image. Prior arts in the field struggle to reconstruct an accurate and scalable 3D model due to either the inefficient and expensive…

Computer Vision and Pattern Recognition · Computer Science 2019-11-18 Anh-Duc Nguyen , Seonghwa Choi , Woojae Kim , Sanghoon Lee

We introduce several geometric notions, including the width of a homology class, to the theory of persistent homology. These ideas provide geometric interpretations of persistence diagrams. Indeed, we give quantitative and geometric…

Algebraic Topology · Mathematics 2022-12-27 Henry Adams , Baris Coskunuzer

In this paper, we consider topological featurizations of data defined over simplicial complexes, like images and labeled graphs, obtained by convolving this data with various filters before computing persistence. Viewing a convolution…

Algebraic Topology · Mathematics 2024-01-26 Elchanan Solomon , Paul Bendich

We use persistent homology in order to define a family of fractal dimensions, denoted $\mathrm{dim}_{\mathrm{PH}}^i(\mu)$ for each homological dimension $i\ge 0$, assigned to a probability measure $\mu$ on a metric space. The case of…

Homological stability for sequences of groups is often proved by studying the spectral sequence associated to the action of a typical group in the sequence on a highly-connected simplicial complex whose stabilizers are related to previous…

Geometric Topology · Mathematics 2018-03-16 Allen Hatcher , Karen Vogtmann

We prove that pointwise finite-dimensional S^1 persistence modules over an arbitrary field decompose uniquely, up to isomorphism, into the direct sum of a bar code and finitely-many Jordan cells. These persistence modules have also been…

Representation Theory · Mathematics 2025-06-19 Eric J. Hanson , Job D. Rock

Given a graph $G$, a subgraph $H$ is isometric if $d_H(u,v) = d_G(u,v)$ for every pair $u,v\in V(H)$, where $d$ is the distance function. A graph $G$ is distance preserving (dp) if it has an isometric subgraph of every possible order. A…

Discrete Mathematics · Computer Science 2018-05-28 Emad Zahedi , Jason P. Smith