Related papers: BioMamba: Domain-Adaptive Biomedical Language Mode…
In the domain of 3D biomedical image segmentation, Mamba exhibits the superior performance for it addresses the limitations in modeling long-range dependencies inherent to CNNs and mitigates the abundant computational overhead associated…
Language models are widely used in chemistry for molecular property prediction and small-molecule generation, yet Natural Products (NPs) remain underexplored despite their importance in drug discovery. To address this gap, we develop…
In multichannel speech enhancement, effectively capturing spatial and spectral information across different microphones is crucial for noise reduction. Traditional methods, such as CNN or LSTM, attempt to model the temporal dynamics of…
This paper introduces Bio-Inspired Mamba (BIM), a novel online learning framework for selective state space models that integrates biological learning principles with the Mamba architecture. BIM combines Real-Time Recurrent Learning (RTRL)…
Our team participated in the BioASQ 2024 Task12b and Synergy tasks to build a system that can answer biomedical questions by retrieving relevant articles and snippets from the PubMed database and generating exact and ideal answers. We…
Transformer-based large language models (LLMs) are increasingly being adopted in networking research to address domain-specific challenges. However, their quadratic time complexity and substantial model sizes often result in significant…
Recent advances in deep learning have made it possible to predict phenotypic measures directly from functional magnetic resonance imaging (fMRI) brain volumes, sparking significant interest in the neuroimaging community. However, existing…
Recent advances in multimodal learning have significantly improved cancer survival risk prediction. However, the joint prognostic potential of protein markers and histopathology images remains underexplored, largely due to the high cost and…
Addressing the dual challenges of local redundancy and global dependencies in video understanding, this work innovatively adapts the Mamba to the video domain. The proposed VideoMamba overcomes the limitations of existing 3D convolution…
Coreference resolution in biomedical texts presents unique challenges due to complex domain-specific terminology, high ambiguity in mention forms, and long-distance dependencies between coreferring expressions. In this work, we present a…
Large Language Models (LLMs) demonstrate remarkable versatility in various NLP tasks but encounter distinct challenges in biomedical due to the complexities of language and data scarcity. This paper investigates LLMs application in the…
While deep learning techniques have shown promising results in many natural language processing (NLP) tasks, it has not been widely applied to the clinical domain. The lack of large datasets and the pervasive use of domain-specific language…
Adapting general multimodal large language models (MLLMs) to specific domains, such as scientific and industrial fields, is highly significant in promoting their practical applications. This paper systematically investigates domain…
Multi-modal learning that combines pathological images with genomic data has significantly enhanced the accuracy of survival prediction. Nevertheless, existing methods have not fully utilized the inherent hierarchical structure within both…
Predicting user preferences and sequential dependencies based on historical behavior is the core goal of sequential recommendation. Although attention-based models have shown effectiveness in this field, they often struggle with inference…
In recent years, Visual Question Localized-Answering in robotic surgery (Surgical-VQLA) has gained significant attention for its potential to assist medical students and junior doctors in understanding surgical scenes. Recently, the rapid…
The Mamba-based model has demonstrated outstanding performance across tasks in computer vision, natural language processing, and speech processing. However, in the realm of speech processing, the Mamba-based model's performance varies…
In multilingual healthcare applications, the availability of domain-specific natural language processing(NLP) tools is limited, especially for low-resource languages. Although multilingual bidirectional encoder representations from…
Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…
Developing effective biomedical retrieval models is important for excelling at knowledge-intensive biomedical tasks but still challenging due to the deficiency of sufficient publicly annotated biomedical data and computational resources. We…