English
Related papers

Related papers: Transcriptomics-guided Slide Representation Learni…

200 papers

Structured Illumination Microscopy (SIM) enables rapid, high-contrast optical sectioning of fresh tissue without staining or physical sectioning, making it promising for intraoperative and point-of-care diagnostics. Recent foundation and…

Deep learning has shown strong potential in cancer classification from whole-slide images (WSIs), but the need for extensive expert annotations often limits its success. Annotation-free approaches, such as multiple instance learning (MIL)…

Computer Vision and Pattern Recognition · Computer Science 2026-03-12 Willmer Rafell Quinones Robles , Sakonporn Noree , Jongwoo Kim , Young Sin Ko , Bryan Wong , Mun Yong Yi

Classification of gigapixel Whole Slide Images (WSIs) is an important prediction task in the emerging area of computational pathology. There has been a surge of research in deep learning models for WSI classification with clinical…

Computer Vision and Pattern Recognition · Computer Science 2023-05-04 Sajid Javed , Arif Mahmood , Talha Qaiser , Naoufel Werghi , Nasir Rajpoot

Spatial transcriptomics (ST) enables gene expression mapping within anatomical context but remains costly and low-throughput. Hematoxylin and eosin (H\&E) staining offers rich morphology yet lacks molecular resolution. We present…

Self-supervised learning (SSL) has made enormous progress and largely narrowed the gap with the supervised ones, where the representation learning is mainly guided by a projection into an embedding space. During the projection, current…

Computer Vision and Pattern Recognition · Computer Science 2022-03-29 Lang Huang , Shan You , Mingkai Zheng , Fei Wang , Chen Qian , Toshihiko Yamasaki

Unsupervised learning has been a long-standing goal of machine learning and is especially important for medical image analysis, where the learning can compensate for the scarcity of labeled datasets. A promising subclass of unsupervised…

Image and Video Processing · Electrical Eng. & Systems 2021-09-09 Ozan Ciga , Tony Xu , Anne L. Martel

Self-Supervised Learning (SSL) has emerged as a powerful paradigm to mitigate the reliance on large, annotated datasets, a common bottleneck in medical image analysis. However, standard SSL methods, which rely on simple geometric and color…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Joao Batista Florindo

In state-of-the-art self-supervised learning (SSL) pre-training produces semantically good representations by encouraging them to be invariant under meaningful transformations prescribed from human knowledge. In fact, the property of…

Computer Vision and Pattern Recognition · Computer Science 2022-03-16 Rumen Dangovski , Li Jing , Charlotte Loh , Seungwook Han , Akash Srivastava , Brian Cheung , Pulkit Agrawal , Marin Soljačić

Automated segmentation of multiple sclerosis (MS) lesions from MRI scans is important to quantify disease progression. In recent years, convolutional neural networks (CNNs) have shown top performance for this task when a large amount of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-10 Jiacheng Wang , Hao Li , Han Liu , Dewei Hu , Daiwei Lu , Keejin Yoon , Kelsey Barter , Francesca Bagnato , Ipek Oguz

In this paper, we address the challenge of few-shot classification in histopathology whole slide images (WSIs) by utilizing foundational vision-language models (VLMs) and slide-level prompt learning. Given the gigapixel scale of WSIs,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-24 Devavrat Tomar , Guillaume Vray , Dwarikanath Mahapatra , Sudipta Roy , Jean-Philippe Thiran , Behzad Bozorgtabar

Objective. Supervised learning paradigms are often limited by the amount of labeled data that is available. This phenomenon is particularly problematic in clinically-relevant data, such as electroencephalography (EEG), where labeling can be…

Machine Learning · Statistics 2020-08-03 Hubert Banville , Omar Chehab , Aapo Hyvärinen , Denis-Alexander Engemann , Alexandre Gramfort

Multiple instance learning (MIL) has emerged as a powerful framework for weakly supervised whole slide image (WSI) classification, enabling slide-level predictions without requiring detailed patch-level annotations. Despite its success, a…

Computer Vision and Pattern Recognition · Computer Science 2025-07-25 Bryan Wong , Mun Yong Yi

Recent advancements in Deep and Self-Supervised Learning (SSL) have led to substantial improvements in Speech Emotion Recognition (SER) performance, reaching unprecedented levels. However, obtaining sufficient amounts of accurately labeled…

Computation and Language · Computer Science 2025-02-25 Bulat Khaertdinov , Pedro Jeuris , Annanda Sousa , Enrique Hortal

We propose a novel continual self-supervised learning (CSSL) framework for simultaneously learning diverse features from multi-window-obtained chest computed tomography (CT) images and ensuring data privacy. Achieving a robust and highly…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Ren Tasai , Guang Li , Ren Togo , Takahiro Ogawa , Kenji Hirata , Minghui Tang , Takaaki Yoshimura , Hiroyuki Sugimori , Noriko Nishioka , Yukie Shimizu , Kohsuke Kudo , Miki Haseyama

Multimodal transformers integrate diverse data types like images, audio, and text, advancing tasks such as audio-visual understanding and image-text retrieval; yet their high parameterization limits deployment on resource-constrained edge…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-10 Timo Fudala , Vasileios Tsouvalas , Nirvana Meratnia

Image-based cell profiling aims to create informative representations of cell images. This technique is critical in drug discovery and has greatly advanced with recent improvements in computer vision. Inspired by recent developments in…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Siran Dai , Qianqian Xu , Peisong Wen , Yang Liu , Qingming Huang

While Multiple Instance Learning (MIL) has shown promising results in digital Pathology Whole Slide Image (WSI) classification, such a paradigm still faces performance and generalization problems due to challenges in high computational…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Honglin Li , Chenglu Zhu , Yunlong Zhang , Yuxuan Sun , Zhongyi Shui , Wenwei Kuang , Sunyi Zheng , Lin Yang

Emotion recognition models using audio input data can enable the development of interactive systems with applications in mental healthcare, marketing, gaming, and social media analysis. While the field of affective computing using audio…

Sound · Computer Science 2023-07-25 Peranut Nimitsurachat , Peter Washington

Recent work has shown that self-supervised pre-training leads to improvements over supervised learning on challenging visual recognition tasks. CLIP, an exciting new approach to learning with language supervision, demonstrates promising…

Computer Vision and Pattern Recognition · Computer Science 2021-12-24 Norman Mu , Alexander Kirillov , David Wagner , Saining Xie

Unsupervised representation learning has significantly advanced various machine learning tasks. In the computer vision domain, state-of-the-art approaches utilize transformations like random crop and color jitter to achieve invariant…

Computer Vision and Pattern Recognition · Computer Science 2025-01-16 Jaemyung Yu , Jaehyun Choi , Dong-Jae Lee , HyeongGwon Hong , Junmo Kim