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Artificial intelligence (AI) application domains consist of a mix of tensor operations with high and low arithmetic intensities (aka reuse). Hierarchical (i.e. compute along multiple levels of memory hierarchy) and heterogeneous (multiple…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-19 Raveesh Garg , Michael Pellauer , Tushar Krishna

Publicly available collections of drug-like molecules have grown to comprise 10s of billions of possibilities in recent history due to advances in chemical synthesis. Traditional methods for identifying "hit" molecules from a large…

Structural biology has made significant progress in determining membrane proteins, leading to a remarkable increase in the number of available structures in dedicated databases. The inherent complexity of membrane protein structures,…

We have demonstrated a versatile method for fabrication of biaxial hyperbolic metamaterials (HMMs) using layered structures consisting of titanium dioxide and copper. In order to enable the biaxial property, an oblique angle deposition…

Optics · Physics 2020-01-28 Changkee Hong , Maarij Syed , Azad Siahmakoun , Hossein Alisafaee

One of the key requirements for incorporating machine learning into the drug discovery process is complete reproducibility and traceability of the model building and evaluation process. With this in mind, we have developed an end-to-end…

Shape-morphing metamaterials enable adaptive structures capable of complex functional deformations, with applications ranging from reconfigurable structures and soft robotics to medical devices. However, their design remains challenging due…

Computational Engineering, Finance, and Science · Computer Science 2026-05-11 Jipeng Cui , Wei "Wayne" Chen

As machine learning permeates more industries and models become more expensive and time consuming to train, the need for efficient automated hyperparameter optimization (HPO) has never been more pressing. Multi-step planning based…

Machine Learning · Computer Science 2022-11-18 Lucio M. Dery , Abram L. Friesen , Nando De Freitas , Marc'Aurelio Ranzato , Yutian Chen

Taxonomic classification in biodiversity research involves organizing biological specimens into structured hierarchies based on evidence, which can come from multiple modalities such as images and genetic information. We investigate whether…

Digital pathology has fundamentally altered diagnostic workflows by enabling the computational analysis of gigapixel Whole Slide Images (WSIs), yet effectively deciphering their complex tumor microenvironments remains a formidable…

Computer Vision and Pattern Recognition · Computer Science 2026-04-28 Xuemei Qiu , Dawei Fan , Yebin Huang , Yanping Chen , Lifang Wei

The hypervolume indicator is one of the most used set-quality indicators for the assessment of stochastic multiobjective optimizers, as well as for selection in evolutionary multiobjective optimization algorithms. Its theoretical properties…

Data Structures and Algorithms · Computer Science 2022-04-14 Andreia P. Guerreiro , Carlos M. Fonseca , Luís Paquete

Breast cancer is the most widespread neoplasm among women and early detection of this disease is critical. Deep learning techniques have become of great interest to improve diagnostic performance. However, distinguishing between malignant…

Image and Video Processing · Electrical Eng. & Systems 2024-04-24 Eleonora Lopez , Filippo Betello , Federico Carmignani , Eleonora Grassucci , Danilo Comminiello

The authors present a generic framework for the parameter optimization of additive manufacturing (AM) processes, one tailored to a high-throughput experimental methodology (HTEM). Given the large number of parameters, which impact the…

Materials Science · Physics 2024-11-20 Baldur Steingrimsson , Ankur Agrawal , Xuesong Fan , Anand Kulkarni , Dan Thoma , Peter Liaw

Peptides are recognized for their varied self-assembly behaviors, forming a wide array of structures and geometries, such as spheres, fibers, and hydrogels, each presenting a unique set of material properties. The functionalities of these…

Biomolecules · Quantitative Biology 2025-05-15 Sarah K. Yorke , Zhenze Yang , Aviad Levin , Alice Ray , Jeremy Owusu Boamah , Tuomas P. J. Knowles , Markus J. Buehler

This study investigates the spatial integration of agent-based models (ABMs) and compartmental models for infectious disease modeling, presenting a novel hybrid approach and examining its implications. ABMs offer detailed insights by…

Populations and Evolution · Quantitative Biology 2025-02-06 Inan Bostanci , Tim Conrad

Pathology is essential for cancer diagnosis, with multiple instance learning (MIL) widely used for whole slide image (WSI) analysis. WSIs exhibit a natural hierarchy -- patches, regions, and slides -- with distinct semantic associations.…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Peixiang Huang , Yanyan Huang , Weiqin Zhao , Junjun He , Lequan Yu

Transformer-based methods have demonstrated excellent performance on super-resolution visual tasks, surpassing conventional convolutional neural networks. However, existing work typically restricts self-attention computation to…

Computer Vision and Pattern Recognition · Computer Science 2024-05-09 Shu-Chuan Chu , Zhi-Chao Dou , Jeng-Shyang Pan , Shaowei Weng , Junbao Li

Superpixels offer a compact image representation by grouping pixels into coherent regions. Recent methods have reached a plateau in terms of segmentation accuracy by generating noisy superpixel shapes. Moreover, most existing approaches…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Julien Walther , Rémi Giraud , Michaël Clément

We propose hMDAP, a hybrid framework for large-scale data analytical processing on Spark, to support multi-paradigm process (incl. OLAP, machine learning, and graph analysis etc.) in distributed environments. The framework features a…

Databases · Computer Science 2017-01-17 Xiaowang Zhang , Jiahui Zhang , Zhiyong Feng

This work tackles two critical challenges related to the development of metaheuristics for Multi-Objective Optimization Problems (MOOPs): the exponential growth of non-dominated solutions and the tendency of metaheuristics to…

Neural and Evolutionary Computing · Computer Science 2026-02-05 Amadeu A. Coco , Cyprien Borée , Julien Baste , Laetitia Jourdan , Lucien Mousin

Lipid nanoparticles (LNPs) are among the most clinically mature platforms for nucleic acid delivery, yet designing lipids that are both effective and biologically safe remains a major bottleneck. In practical screening, toxicity is a…

Artificial Intelligence · Computer Science 2026-05-26 Leshu Li , An Lu , Haiyu Wang , Zhibin Feng , Conghui Duan , Qing Bao , Zongmin Zhao , Sai Qian Zhang
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