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Advances in machine learning over the past decade have resulted in a proliferation of algorithmic applications for encoding, characterizing, and acting on complex data that may contain many high dimensional features. Recently, the emergence…

Brain Foundation Models (BFMs) are transforming neuroscience by enabling scalable and transferable learning from neural signals, advancing both clinical diagnostics and cutting-edge neuroscience exploration. Their emergence is powered by…

Machine Learning · Computer Science 2026-02-13 Fanqi Shen , Enhong Yang , Jiahe Li , Junru Hong , Xiaoran Pan , Zhizhang Yuan , Meng Li , Yang Yang

Advancements in artificial intelligence (AI) have transformed many scientific fields, with microbiology and microbiome research now experiencing significant breakthroughs through machine learning applications. This review provides a…

Quantitative Methods · Quantitative Biology 2025-12-19 Xu-Wen Wang , Tong Wang , Yang-Yu Liu

Ultrasound imaging is widely used in clinical diagnosis due to its non-invasive nature and real-time capabilities. However, traditional ultrasound diagnostics relies heavily on physician expertise and is often hampered by suboptimal image…

Image and Video Processing · Electrical Eng. & Systems 2025-12-18 Yuncheng Jiang , Chun-Mei Feng , Jinke Ren , Jun Wei , Zixun Zhang , Yiwen Hu , Yunbi Liu , Rui Sun , Xuemei Tang , Juan Du , Xiang Wan , Yong Xu , Bo Du , Xin Gao , Guangyu Wang , Shaohua Zhou , Shuguang Cui , Zhen Li

Foundation models (FMs) have shown transformative potential in radiology by performing diverse, complex tasks across imaging modalities. Here, we developed CT-FM, a large-scale 3D image-based pre-trained model designed explicitly for…

Image and Video Processing · Electrical Eng. & Systems 2025-02-27 Suraj Pai , Ibrahim Hadzic , Dennis Bontempi , Keno Bressem , Benjamin H. Kann , Andriy Fedorov , Raymond H. Mak , Hugo J. W. L. Aerts

Social problems stemming from the shortage of radiologists are intensifying, and artificial intelligence is being highlighted as a potential solution. Recently emerging large-scale generative AI has expanded from large language models…

Computer Vision and Pattern Recognition · Computer Science 2024-09-23 Inwoo Seo , Eunkyoung Bae , Joo-Young Jeon , Young-Sang Yoon , Jiho Cha

For over two decades, image-based profiling has revolutionized cell phenotype analysis. Image-based profiling processes rich, high-throughput, microscopy data into thousands of unbiased measurements that reveal phenotypic patterns powerful…

Foundation models are deep neural networks (such as GPT-5, Gemini~3, and Opus~4) trained on large datasets that can perform diverse downstream tasks -- text and code generation, question answering, summarization, image classification, and…

Machine Learning · Computer Science 2026-05-01 Logan G Wright , Tianyu Wang , Tatsuhiro Onodera , Peter L. McMahon

Large AI models, or foundation models, are models recently emerging with massive scales both parameter-wise and data-wise, the magnitudes of which can reach beyond billions. Once pretrained, large AI models demonstrate impressive…

Artificial Intelligence · Computer Science 2023-09-26 Jianing Qiu , Lin Li , Jiankai Sun , Jiachuan Peng , Peilun Shi , Ruiyang Zhang , Yinzhao Dong , Kyle Lam , Frank P. -W. Lo , Bo Xiao , Wu Yuan , Ningli Wang , Dong Xu , Benny Lo

Following its success for vision and text, the "foundation model" (FM) paradigm -- pretraining large models on massive data, then fine-tuning on target tasks -- has rapidly expanded to domains in the sciences, engineering, healthcare, and…

Machine Learning · Computer Science 2025-03-24 Zongzhe Xu , Ritvik Gupta , Wenduo Cheng , Alexander Shen , Junhong Shen , Ameet Talwalkar , Mikhail Khodak

Parallel to rapid advancements in foundation model research, the past few years have witnessed a surge in music AI applications. As AI-generated and AI-augmented music become increasingly mainstream, many researchers in the music AI…

Sound · Computer Science 2026-02-13 Megan Wei , Mateusz Modrzejewski , Aswin Sivaraman , Dorien Herremans

Recent advancements in pre-trained large foundation models (LFM) have yielded significant breakthroughs across various domains, including natural language processing and computer vision. These models have been particularly impactful in the…

Image and Video Processing · Electrical Eng. & Systems 2024-05-22 Ziqin Lin , Heng Li , Zinan Li , Huazhu Fu , Jiang Liu

This paper aims at identifying emerging computational intelligence trends for the design and modeling of complex biometric-enabled infrastructure and systems. Biometric-enabled systems are evolving towards deep learning and deep inference…

Computer Vision and Pattern Recognition · Computer Science 2020-06-23 Svetlana Yanushkevich , Shawn Eastwood , Kenneth Lai , Vlad Shmerko

Federated Learning (FL), while a breakthrough in decentralized machine learning, contends with significant challenges such as limited data availability and the variability of computational resources, which can stifle the performance and…

Machine Learning · Computer Science 2025-10-07 Jiaqi Wang , Xi Li

Federated learning (FL) offers privacy-preserving decentralized machine learning, optimizing models at edge clients without sharing private data. Simultaneously, foundation models (FMs) have gained traction in the artificial intelligence…

Machine Learning · Computer Science 2023-10-06 Sixing Yu , J. Pablo Muñoz , Ali Jannesari

Deep Feedback Models (DFMs) are a new class of stateful neural networks that combine bottom up input with high level representations over time. This feedback mechanism introduces dynamics into otherwise static architectures, enabling DFMs…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 David Calhas , Arlindo L. Oliveira

Bioinformatics research is characterized by voluminous and incremental datasets and complex data analytics methods. The machine learning methods used in bioinformatics are iterative and parallel. These methods can be scaled to handle big…

Computational Engineering, Finance, and Science · Computer Science 2015-06-17 Hirak Kashyap , Hasin Afzal Ahmed , Nazrul Hoque , Swarup Roy , Dhruba Kumar Bhattacharyya

Recent advances in machine learning have made revolutionary breakthroughs in computer games, image and natural language understanding, and scientific discovery. Foundation models and large-scale language models (LLMs) have recently achieved…

Neurons and Cognition · Quantitative Biology 2023-10-31 Ran Wang , Zhe Sage Chen
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