Related papers: The Leaf Function of Penrose P2 Graphs
Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…
Given a class of graphs $\mathcal{H}$, the problem $\oplus\mathsf{Sub}(\mathcal{H})$ is defined as follows. The input is a graph $H\in \mathcal{H}$ together with an arbitrary graph $G$. The problem is to compute, modulo $2$, the number of…
Tanglegrams are formed by taking two rooted binary trees $T$ and $S$ with the same number of leaves and uniquely matching each leaf in $T$ with a leaf in $S$. They are usually represented using layouts, which embed the trees and the…
For a graph $G$, let $\nu_s(G)$ be the induced matching number of $G$. We prove that $\nu_s(G) \geq \frac{n(G)}{(\lceil\frac{\Delta}{2}\rceil+1) (\lfloor\frac{\Delta}{2}\rfloor+1)}$ for every graph of sufficiently large maximum degree…
Let $T$ be a tree. A vertex of degree one is a \emph{leaf} of $T$ and a vertex of degree at least three is a \emph{branch vertex} of $T$. A graph is said to be claw-free if it does not contain $K_{1,3}$ as an induced subgraph. In this…
The overlap graphs of subtrees of a tree are equivalent to subtree filament graphs, the overlap graphs of subtrees of a star are cocomparability graphs, and the overlap graphs of subtrees of a caterpillar are interval filament graphs. In…
Generating graphs from a target distribution is a significant challenge across many domains, including drug discovery and social network analysis. In this work, we introduce a novel graph generation method leveraging $K^2$-tree…
The problem of computing all maximal induced subgraphs of a graph G that have a graph property P, also called the maximal P-subgraphs problem, is considered. This problem is studied for hereditary, connected-hereditary and rooted-hereditary…
In this paper, we introduce tiled graphs as models of learning and maturing processes. We show how tiled graphs can combine graphs of learning spaces or antimatroids (partial hypercubes) and maturity models (total orders) to yield models of…
In a recent paper, McDiarmid, Semple, and Welsh (2015) showed that the number of tree-child networks with $n$ leaves has the factor $n^{2n}$ in its main asymptotic growth term. In this paper, we improve this by completely identifying the…
We study the problem of maximizing the number of full degree vertices in a spanning tree $T$ of a graph $G$; that is, the number of vertices whose degree in $T$ equals its degree in $G$. In cubic graphs, this problem is equivalent to…
Topological drawings are natural representations of graphs in the plane, where vertices are represented by points, and edges by curves connecting the points. Topological drawings of complete graphs and of complete bipartite graphs have been…
Combinatorial Hopf algebras of trees exemplify the connections between operads and bialgebras. Painted trees were introduced recently as examples of how graded Hopf operads can bequeath Hopf structures upon compositions of coalgebras. We…
In the $k$-Leaf Out-Branching and $k$-Internal Out-Branching problems we are given a directed graph $D$ with a designated root $r$ and a nonnegative integer $k$. The question is to determine the existence of an outbranching rooted at $r$…
In this paper, we focus on the class of complete $S$-partite graphs, for $S$ an undirected graph possibly with self-loops, and address the problem of finding largest $2$-regular subgraphs of these graphs, which can be formulated as an…
Tiered trees were introduced as a combinatorial object for counting absolutely indecomposable representation of certain quivers and torus orbit of certain homogeneous variety. In this paper, we define a bijection between the set of…
We introduce a new subclass of chordal graphs that generalizes split graphs, which we call well-partitioned chordal graphs. Split graphs are graphs that admit a partition of the vertex set into cliques that can be arranged in a star…
Given a class of graphs F, we say that a graph G is universal for F, or F-universal, if every H in F is contained in G as a subgraph. The construction of sparse universal graphs for various families F has received a considerable amount of…
Leaves, i.e., vertices of degree one, can play a significant role in graph structure, especially in sparsely connected settings in which leaves often constitute the largest fraction of vertices. We consider a leaf-based counterpart of the…
In this article, we give two extended space formulations, respectively, for the induced tree and path polytopes of chordal graphs with vertex and edge variables. These formulations are obtained by proving that the induced tree and path…