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In phylogenetics, a central problem is to infer the evolutionary relationships between a set of species $X$; these relationships are often depicted via a phylogenetic tree -- a tree having its leaves univocally labeled by elements of $X$…

Data Structures and Algorithms · Computer Science 2016-04-12 Julien Baste , Christophe Paul , Ignasi Sau , Celine Scornavacca

We study the Seifert surfaces of a link by relating the embeddings of graphs by using induced graphs. As applications, we prove that every link $L$ is the boundary of an oriented surface which is obtained from a graph embedding of a…

Geometric Topology · Mathematics 2014-09-11 Dongseok Kim

It is known that any chordal graph on $n$ vertices can be represented as the intersection of $n$ subtrees in a tree on $n$ nodes. This fact is recently used in [2] to generate random chordal graphs on $n$ vertices by generating $n$ subtrees…

Data Structures and Algorithms · Computer Science 2019-05-20 Tınaz Ekim , Mordechai Shalom , Oylum Şeker

The treewidth of a graph is an important invariant in structural and algorithmic graph theory. This paper studies the treewidth of line graphs. We show that determining the treewidth of the line graph of a graph $G$ is equivalent to…

Combinatorics · Mathematics 2014-09-25 Daniel J. Harvey , David R. Wood

A recursive scheme relying on decagons is used to generate Penrose-like sublattices or tilings. Its relevance for understanding structures with non-crystallographic symmetry is discussed.

Other Condensed Matter · Physics 2007-11-28 A. Losev

An identifying code $C$ of a graph $G$ is a dominating set of $G$ such that any two distinct vertices of $G$ have distinct closed neighbourhoods within $C$. These codes have been widely studied for over two decades. We give an improvement…

Combinatorics · Mathematics 2022-11-14 Florent Foucaud , Tuomo Lehtilä

The graph parameter treedepth is minor-monotone; hence, the class of graphs with treedepth at most $k$ is minor-closed. By the Graph Minor Theorem, such a class is characterized by a finite set of forbidden minors. A conjecture of…

Discrete Mathematics · Computer Science 2025-12-02 Kolja Kühn

The enumeration of chemical graphs is an important topic in cheminformatics and bioinformatics, particularly in the discovery of novel drugs. These graphs are typically either tree-like multigraphs or composed of tree-like multigraphs…

Discrete Mathematics · Computer Science 2025-02-11 Muhammad Ilyas , Seemab Hayat , Naveed Ahmed Azam

We define an elementary relatively $\mathbb Z/4$ graded Lagrangian-Floer chain complex for restricted immersions of compact 1-manifolds into the pillowcase, and apply it to the intersection diagram obtained by taking traceless $SU(2)$…

Geometric Topology · Mathematics 2015-01-05 Matthew Hedden , Christopher M. Herald , Paul Kirk

For a graph property $\Pi$, Subgraph Complementation to $\Pi$ is the problem to find whether there is a subset $S$ of vertices of the input graph $G$ such that modifying $G$ by complementing the subgraph induced by $S$ results in a graph…

Data Structures and Algorithms · Computer Science 2022-08-23 Dhanyamol Antony , Sagartanu Pal , R. B. Sandeep , R. Subashini

We present a new formulation of the loop-tree duality theorem for higher loop diagrams valid both for massless and massive cases. $l$-loop integrals are expressed as weighted sum of trees obtained from cutting $l$ internal propagators of…

High Energy Physics - Phenomenology · Physics 2019-11-22 Robert Runkel , Zoltán Szőr , Juan Pablo Vesga , Stefan Weinzierl

We consider intrinsic linking and knotting in the context of directed graphs. We construct an example of a directed graph that contains a consistently oriented knotted cycle in every embedding. We also construct examples of intrinsically…

Geometric Topology · Mathematics 2017-12-29 Thomas Fleming , Joel Foisy

A subgraph of an edge-coloured graph is called rainbow if all its edges have distinct colours. The study of rainbow subgraphs goes back more than two hundred years to the work of Euler on Latin squares. Since then rainbow structures have…

Combinatorics · Mathematics 2018-12-11 Richard Montgomery , Alexey Pokrovskiy , Benny Sudakov

A monotone drawing of a graph G is a straight-line drawing of G such that every pair of vertices is connected by a path that is monotone with respect to some direction. Trees, as a special class of graphs, have been the focus of several…

Data Structures and Algorithms · Computer Science 2025-05-19 Anargyros Oikonomou , Antonios Symvonis

A split-by-edges tree of a graph G on n vertices is a binary tree T where the root = V(G), every leaf is an independent set in G, and for every other node N in T with children L and R there is a pair of vertices {u, v} in N such that L = N…

Data Structures and Algorithms · Computer Science 2015-05-14 Asbjørn Brændeland

In this paper, we introduce two families of planar and self-similar graphs which have small-world properties. The constructed models are based on an iterative process where each step of a certain formulation of modules results in a final…

Combinatorics · Mathematics 2024-04-19 Muhammed Alaa Morsy , Mohamed Anwar , Abdallah Aboutahoun

We prove NP-completeness of Yin-Yang / Shiromaru-Kuromaru pencil-and-paper puzzles. Viewed as a graph partitioning problem, we prove NP-completeness of partitioning a rectangular grid graph into two induced trees (normal Yin-Yang), or into…

Computational Complexity · Computer Science 2021-06-30 Erik D. Demaine , Jayson Lynch , Mikhail Rudoy , Yushi Uno

We study upward planar straight-line embeddings (UPSE) of directed trees on given point sets. The given point set $S$ has size at least the number of vertices in the tree. For the special case where the tree is a path $P$ we show that: (a)…

Computational Geometry · Computer Science 2020-12-22 Elena Arseneva , Pilar Cano , Linda Kleist , Tamara Mchedlidze , Saeed Mehrabi , Irene Parada , Pavel Valtr

In this work we introduce and study tree-like tableaux, which are certain fillings of Ferrers diagrams in simple bijection with permutation tableaux and alternative tableaux. We exhibit an elementary insertion procedure on our tableaux…

Combinatorics · Mathematics 2014-04-15 Jean-Christophe Aval , Adrien Boussicault , Philippe Nadeau

Albertson and Berman conjectured that every planar graph has an induced forest on half of its vertices. The best known lower bound, due to Borodin, is that every planar graph has an induced forest on two fifths of its vertices. In a related…

Combinatorics · Mathematics 2026-03-19 Glencora Borradaile , Hung Le , Melissa Sherman-Bennett