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Molecular dynamics (MD) simulations are widely used to study large-scale molecular systems. HPC systems are ideal platforms to run these studies, however, reaching the necessary simulation timescale to detect rare processes is challenging,…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-22 Tu Mai Anh Do , Loïc Pottier , Rafael Ferreira da Silva , Frédéric Suter , Silvina Caíno-Lores , Michela Taufer , Ewa Deelman

Scientific workflows typically comprise a multitude of different processing steps which often are executed in parallel on different partitions of the input data. These executions, in turn, must be scheduled on the compute nodes of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-18 Jonathan Bader , Fabian Lehmann , Alexander Groth , Lauritz Thamsen , Dominik Scheinert , Jonathan Will , Ulf Leser , Odej Kao

Interactive urgent computing is a small but growing user of supercomputing resources. However there are numerous technical challenges that must be overcome to make supercomputers fully suited to the wide range of urgent workloads which…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-29 Nick Brown , Rupert Nash , Gordon Gibb , Evgenij Belikov , Artur Podobas , Wei Der Chien , Stefano Markidis , Markus Flatken , Andreas Gerndt

As the amount of available data continues to grow in fields as diverse as bioinformatics, physics, and remote sensing, the importance of scientific workflows in the design and implementation of reproducible data analysis pipelines…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-11 Jonathan Bader , Fabian Skalski , Fabian Lehmann , Dominik Scheinert , Jonathan Will , Lauritz Thamsen , Odej Kao

Computational Workflows are widely used in data analysis, enabling innovation and decision-making. In many domains (bioinformatics, image analysis, & radio astronomy) the analysis components are numerous and written in multiple different…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-24 Michael R. Crusoe , Sanne Abeln , Alexandru Iosup , Peter Amstutz , John Chilton , Nebojša Tijanić , Hervé Ménager , Stian Soiland-Reyes , Bogdan Gavrilovic , Carole Goble

In the ever-evolving landscape of scientific computing, properly supporting the modularity and complexity of modern scientific applications requires new approaches to workflow execution, like seamless interoperability between different…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-12 Iacopo Colonnelli , Doriana Medić , Alberto Mulone , Viviana Bono , Luca Padovani , Marco Aldinucci

Cloud Computing is becoming the leading paradigm for executing scientific and engineering workflows. The large-scale nature of the experiments they model and their variable workloads make clouds the ideal execution environment due to prompt…

Neural and Evolutionary Computing · Computer Science 2018-11-05 David A. Monge , Elina Pacini , Cristian Mateos , Enrique Alba , Carlos García Garino

We consider ML query processing in distributed systems where GPU-enabled workers coordinate to execute complex queries: a computing style often seen in applications that interact with users in support of image processing and natural…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-29 Yuting Yang , Andrea Merlina , Weijia Song , Tiancheng Yuan , Ken Birman , Roman Vitenberg

It is generally desirable for high-performance computing (HPC) applications to be portable between HPC systems, for example to make use of more performant hardware, make effective use of allocations, and to co-locate compute jobs with large…

The role of scalable high-performance workflows and flexible workflow management systems that can support multiple simulations will continue to increase in importance. For example, with the end of Dennard scaling, there is a need to…

Software Engineering · Computer Science 2017-10-19 Jay Jay Billings , Shantenu Jha

The "IMP Science Gateway Portal" (http://scigate.imp.kiev.ua) for complex workflow management and integration of distributed computing resources (like clusters, service grids, desktop grids, clouds) is presented. It is created on the basis…

Computational Engineering, Finance, and Science · Computer Science 2014-04-23 Yuri Gordienko , Lev Bekenov , Olexandr Gatsenko , Elena Zasimchuk , Valentin Tatarenko

Although High Performance Computing (HPC) users understand basic resource requirements such as the number of CPUs and memory limits, internal infrastructural utilization data is exclusively leveraged by cluster operators, who use it to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-19 Abel Souza , Kristiaan Pelckmans , Johan Tordsson

Task graphs provide a simple way to describe scientific workflows (sets of tasks with dependencies) that can be executed on both HPC clusters and in the cloud. An important aspect of executing such graphs is the used scheduling algorithm.…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-18 Jakub Beránek , Stanislav Böhm , Vojtěch Cima

Human involvement is critical in training and deploying AI systems in high-stakes defence and security contexts. However, real-time interaction is impractical in HPC environments due to compute intensity and resource constraints. We present…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-06 Sergio Mendoza , Cedric Bhihe , Natalia Zamora , David Modesto , Jose Martin Bugallo Batalla , Jesus Gomez Canovas , Rafel Palomo Avellaneda , Miguel Perez Espinosa

Today, cloud workloads are essentially opaque to the cloud platform. Typically, the only information the platform receives is the virtual machine (VM) type and possibly a decoration to the type (e.g., the VM is evictable). Similarly,…

Scientific workflows are becoming increasingly popular for compute-intensive and data-intensive scientific applications. The vision and promise of scientific workflows includes rapid, easy workflow design, reuse, scalable execution, and…

Databases · Computer Science 2013-11-26 Víctor Cuevas-Vicenttín , Saumen Dey , Sven Köhler , Sean Riddle , Bertram Ludäscher

The Workflows Community Summit gathered 111 participants from 18 countries to discuss emerging trends and challenges in scientific workflows, focusing on six key areas: time-sensitive workflows, AI-HPC convergence, multi-facility workflows,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-22 Rafael Ferreira da Silva , Deborah Bard , Kyle Chard , Shaun de Witt , Ian T. Foster , Tom Gibbs , Carole Goble , William Godoy , Johan Gustafsson , Utz-Uwe Haus , Stephen Hudson , Shantenu Jha , Laila Los , Drew Paine , Frédéric Suter , Logan Ward , Sean Wilkinson , Marcos Amaris , Yadu Babuji , Jonathan Bader , Riccardo Balin , Daniel Balouek , Sarah Beecroft , Khalid Belhajjame , Rajat Bhattarai , Wes Brewer , Paul Brunk , Silvina Caino-Lores , Henri Casanova , Daniela Cassol , Jared Coleman , Taina Coleman , Iacopo Colonnelli , Anderson Andrei Da Silva , Daniel de Oliveira , Pascal Elahi , Nour Elfaramawy , Wael Elwasif , Brian Etz , Thomas Fahringer , Wesley Ferreira , Rosa Filgueira , Jacob Fosso Tande , Luiz Gadelha , Andy Gallo , Daniel Garijo , Yiannis Georgiou , Philipp Gritsch , Patricia Grubel , Amal Gueroudji , Quentin Guilloteau , Carlo Hamalainen , Rolando Hong Enriquez , Lauren Huet , Kevin Hunter Kesling , Paula Iborra , Shiva Jahangiri , Jan Janssen , Joe Jordan , Sehrish Kanwal , Liliane Kunstmann , Fabian Lehmann , Ulf Leser , Chen Li , Peini Liu , Jakob Luettgau , Richard Lupat , Jose M. Fernandez , Ketan Maheshwari , Tanu Malik , Jack Marquez , Motohiko Matsuda , Doriana Medic , Somayeh Mohammadi , Alberto Mulone , John-Luke Navarro , Kin Wai Ng , Klaus Noelp , Bruno P. Kinoshita , Ryan Prout , Michael R. Crusoe , Sashko Ristov , Stefan Robila , Daniel Rosendo , Billy Rowell , Jedrzej Rybicki , Hector Sanchez , Nishant Saurabh , Sumit Kumar Saurav , Tom Scogland , Dinindu Senanayake , Woong Shin , Raul Sirvent , Tyler Skluzacek , Barry Sly-Delgado , Stian Soiland-Reyes , Abel Souza , Renan Souza , Domenico Talia , Nathan Tallent , Lauritz Thamsen , Mikhail Titov , Benjamin Tovar , Karan Vahi , Eric Vardar-Irrgang , Edite Vartina , Yuandou Wang , Merridee Wouters , Qi Yu , Ziad Al Bkhetan , Mahnoor Zulfiqar

Virtual e-Science infrastructures supporting Web-based scientific workflows are an example for knowledge-intensive collaborative and weakly-structured processes where the interaction with the human scientists during process execution plays…

Artificial Intelligence · Computer Science 2010-12-09 Adrian Paschke , Zhili Zhao

Scientific research in many fields routinely requires the analysis of large datasets, and scientists often employ workflow systems to leverage clusters of computers for their data analysis. However, due to their size and scale, these…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-05 Lauritz Thamsen , Yehia Elkhatib , Paul Harvey , Syed Waqar Nabi , Jeremy Singer , Wim Vanderbauwhede

With recent increasing computational and data requirements of scientific applications, the use of large clustered systems as well as distributed resources is inevitable. Although executing large applications in these environments brings…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-06-30 Alexandru Costan , Florin Pop , Corina Stratan , Ciprian Dobre , Catalin Leordeanu , Valentin Cristea