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Processing of medical images such as MRI or CT presents unique challenges compared to RGB images typically used in computer vision. These include a lack of labels for large datasets, high computational costs, and metadata to describe the…

Image and Video Processing · Electrical Eng. & Systems 2021-08-06 Fernando Pérez-García , Rachel Sparks , Sébastien Ourselin

Head magnetic resonance imaging (MRI) data are routinely collected and shared for research under strict regulatory frameworks that require the removal of direct identifiers prior to data release. However, even after skull stripping, brain…

Computer Vision and Pattern Recognition · Computer Science 2026-05-07 Gaurang Sharma , Harri Polonen , Juha Pajula , Jutta Suksi , Jussi Tohka

Early-stage 3D brain tumor segmentation from magnetic resonance imaging (MRI) scans is crucial for prompt and effective treatment. However, this process faces the challenge of precise delineation due to the tumors' complex heterogeneity.…

Image and Video Processing · Electrical Eng. & Systems 2024-11-26 Ebtihal J. Alwadee , Xianfang Sun , Yipeng Qin , Frank C. Langbein

Accurate segmentation of the stroke lesions using magnetic resonance imaging (MRI) is associated with difficulties due to the complicated anatomy of the brain and the different properties of the lesions. This study introduces the…

Image and Video Processing · Electrical Eng. & Systems 2024-06-11 Muhammad Nouman , Mohamed Mabrok , Essam A. Rashed

Compute-In-Memory (CiM) is a promising solution to accelerate Deep Neural Networks (DNNs) as it can avoid energy-intensive DNN weight movement and use memory arrays to perform low-energy, high-density computations. These benefits have…

Hardware Architecture · Computer Science 2024-11-01 Tanner Andrulis , Joel S. Emer , Vivienne Sze

Objective: The advent of High-Performance Computing (HPC) in recent years has led to its increasing use in brain study through computational models. The scale and complexity of such models are constantly increasing, leading to challenging…

Brain tumors pose a significant global health challenge due to their high prevalence and mortality rates across all age groups. Detecting brain tumors at an early stage is crucial for effective treatment and patient outcomes. This study…

Image and Video Processing · Electrical Eng. & Systems 2023-10-30 Jonayet Miah , Duc M Cao , Md Abu Sayed3 , Md Siam Taluckder , Md Sabbirul Haque , Fuad Mahmud

Deep learning has great potential for accurate detection and classification of diseases with medical imaging data, but the performance is often limited by the number of training datasets and memory requirements. In addition, many deep…

Image and Video Processing · Electrical Eng. & Systems 2021-01-14 Xiaofeng Liu , Fangxu Xing , Chao Yang , C. -C. Jay Kuo , Suma Babu , Georges El Fakhri , Thomas Jenkins , Jonghye Woo

Brain is an organ that controls activities of all the parts of the body. Recognition of automated brain tumor in Magnetic resonance imaging (MRI) is a difficult task due to complexity of size and location variability. This automatic method…

Medical Physics · Physics 2017-06-21 Neha Rani , Sharda Vashisth

In this paper we implemented the algorithm we developed in [1] called 3DPIFCM in a parallel environment by using CUDA on a GPU. In our previous work we introduced 3DPIFCM which performs segmentation of images in noisy conditions and uses…

Computer Vision and Pattern Recognition · Computer Science 2020-02-07 Arie Agranonik , Maya Herman , Mark Last

Extracting information from electronic health records (EHR) is a challenging task since it requires prior knowledge of the reports and some natural language processing algorithm (NLP). With the growing number of EHR implementations, such…

Machine Learning · Computer Science 2019-08-02 Sanghyun Choi , Nikita Ivkin , Vladimir Braverman , Michael A. Jacobs

Recent advances in digital imaging, e.g., increased number of pixels captured, have meant that the volume of data to be processed and analyzed from these images has also increased. Deep learning algorithms are state-of-the-art for analyzing…

Image and Video Processing · Electrical Eng. & Systems 2022-04-20 Maged Abdalla Helmy Abdou , Paulo Ferreira , Eric Jul , Tuyen Trung Truong

Purpose: Volumetric ultrafast ultrasound produces massive datasets with high frame rates, dense reconstruction grids, and large channel counts. Beamforming computational demands limit research throughput and prevent real-time applications…

Medical Physics · Physics 2026-04-09 Charles Guan , Alexander P. Rockhill , Masashi Sode , Gianmarco Pinton

Brain tumors require an assessment to ensure timely diagnosis and effective patient treatment. Morphological factors such as size, location, texture, and variable appearance complicate tumor inspection. Medical imaging presents challenges,…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Md. Zahid Hasan , Abdullah Tamim , D. M. Asadujjaman , Md. Mahfujur Rahman , Md. Abu Ahnaf Mollick , Nosin Anjum Dristi , Abdullah-Al-Noman

In neuroimaging analysis, fMRI can well assess the function changes for brain diseases with no obvious structural lesions. To date, most deep-learning-based fMRI studies have employed functional connectivity (FC) as the basic feature for…

Image and Video Processing · Electrical Eng. & Systems 2023-03-03 Wei Dai , Ziyao Zhang , Lixia Tian , Shengyuan Yu , Shuhui Wang , Zhao Dong , Hairong Zheng

Recent evidence suggests that modeling higher-order interactions (HOIs) in functional magnetic resonance imaging (fMRI) data can enhance the diagnostic accuracy of machine learning systems. However, effectively extracting and utilizing HOIs…

Machine Learning · Computer Science 2025-11-04 Kunyu Zhang , Qiang Li , Shujian Yu

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

Quantitative Methods · Quantitative Biology 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

Nuclear Magnetic Resonance (NMR) spectroscopy has served as a powerful analytical tool for studying molecular structure and dynamics in chemistry and biology. However, the processing of raw data acquired from NMR spectrometers and…

Quantitative Methods · Quantitative Biology 2023-09-15 Di Guo , Sijin Li , Jun Liu , Zhangren Tu , Tianyu Qiu , Jingjing Xu , Liubin Feng , Donghai Lin , Qing Hong , Meijin Lin , Yanqin Lin , Xiaobo Qu

Advanced minimally invasive neurosurgery navigation relies mainly on Magnetic Resonance Imaging (MRI) guidance. MRI guidance, however, only provides pre-operative information in the majority of the cases. Once the surgery begins, the value…

Computer Vision and Pattern Recognition · Computer Science 2024-04-25 Gary Sarwin , Alessandro Carretta , Victor Staartjes , Matteo Zoli , Diego Mazzatenta , Luca Regli , Carlo Serra , Ender Konukoglu

Accurate compensation of brain deformation is a critical challenge for reliable image-guided neurosurgery, as surgical manipulation and tumor resection induce tissue motion that misaligns preoperative planning images with intraoperative…

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