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Folding and aggregation of proteins, the interaction between proteins and membranes, as well as the adsorption of organic soft matter to inorganic solid substrates belong to the most interesting challenges in understanding structure and…

Soft Condensed Matter · Physics 2007-12-06 Michael Bachmann , Wolfhard Janke

For the vast majority of naturally occurring, small, single domain proteins folding is often described as a two-state process that lacks detectable intermediates. This observation has often been rationalized on the basis of a nucleation…

Biomolecules · Quantitative Biology 2007-07-09 R. D. M. Travasso , P. F. N. Faisca , M. M. Telo da Gama

The exploration of Terahertz (THz) waves has captivated researchers across diverse scientific disciplines such as physics, spectroscopy, chemistry, biology, and engineering, driven by the myriad applications these waves offer. Within this…

Plasma Physics · Physics 2026-01-08 A. A. Molavi Choobini , S. S. Ghaffari-Oskooei , M. Shahmansouri , F. M. Aghamir

Specific protein-protein interactions are crucial in the cell, both to ensure the formation and stability of multi-protein complexes, and to enable signal transduction in various pathways. Functional interactions between proteins result in…

Biological Physics · Physics 2016-11-21 Anne-Florence Bitbol , Robert S. Dwyer , Lucy J. Colwell , Ned S. Wingreen

Terahertz time-domain spectroscopy (THz-TDS) has become a powerful tool for investigating the optical properties of thin films, offering direct access to the complex permittivity in the terahertz range. However, in transmission-based…

Proteins created by combinatorial methods in vitro are an important source of information for understanding sequence-structure-function relationships. Alignments of folded proteins from combinatorial libraries can be analyzed using methods…

Biomolecules · Quantitative Biology 2007-05-23 Jeffrey B. Endelman , Jesse D. Bloom , Christopher R. Otey , Marco Landwehr , Frances H. Arnold

Nanodevices with Terahertz (THz)-based wireless communication capabilities are providing a primer for flow-guided localization within the human bloodstreams. Such localization is allowing for assigning the locations of sensed events with…

Networking and Internet Architecture · Computer Science 2024-08-05 Filip Lemic , Gerard Calvo Bartra , Arnau Brosa López , Jorge Torres Gómez , Jakob Struye , Falko Dressler , Sergi Abadal , Xavier Costa Perez

Emerging wireless services with extremely high data rate requirements, such as real-time extended reality applications, mandate novel solutions to further increase the capacity of future wireless networks. In this regard, leveraging large…

Signal Processing · Electrical Eng. & Systems 2020-03-11 Reza Barazideh , Omid Semiari , Solmaz Niknam , Balasubramaniam Natarajan

To manipulate the protein population at certain functional state through chemical stabilizers is crucial for protein-related studies. It not only plays a key role in protein structure analysis and protein folding kinetics, but also affects…

Biomolecules · Quantitative Biology 2024-08-13 Mengshou Wang , Liangrong Pengb , Baoguo Jia , Liu Hong

Nanoconfined waters have been extensively studied within various systems, demonstrating low permittivity under static conditions; however, their dynamics have been largely unexplored due to the lack of a robust platform, particularly in the…

Terahertz (THz) band is expected to be one of the key enabling technologies of the sixth generation (6G) wireless networks because of its abundant available bandwidth and very narrow beam width. Due to high frequency operations,…

Signal Processing · Electrical Eng. & Systems 2024-10-28 Ahmet M. Elbir , Wei Shi , Anastasios K. Papazafeiropoulos , Pandelis Kourtessis , Symeon Chatzinotas

Protein folding is the intricate process by which a linear sequence of amino acids self-assembles into a unique three-dimensional structure. Protein folding kinetics is the study of pathways and time-dependent mechanisms a protein undergoes…

Machine Learning · Computer Science 2023-09-19 Vijay Arvind. R , Haribharathi Sivakumar , Brindha. R

The advent of ultrafast science with pulsed electron beams raised the need in controlling the temporal features of the electron pulses. One promising suggestion is the nano-selective quantum optics with multi-electrons, which scales…

Optics · Physics 2023-08-07 Yarden Mazor , Ofer Kfir

We experimentally demonstrate at terahertz frequencies that a planar metamaterial exhibits a spectral response resembling electromagnetically induced transparency. The metamaterial unit cell consists of a split ring surrounded by another…

The motion involved in barrier crossing for protein folding are investigated in terms of the chain dynamics of the polymer backbone, completing the microscopic description of protein folding presented in the previous paper. Local reaction…

Soft Condensed Matter · Physics 2009-10-31 John J. Portman , Shoji Takada , Peter G. Wolynes

Exploring and understanding the protein-folding problem has been a long-standing challenge in molecular biology. Here, using molecular dynamics simulation, we reveal how parallel distributed adjacent planar peptide groups of unfolded…

Biomolecules · Quantitative Biology 2019-01-11 Xiaoliang Ma , Chengyu Hou , Liping Shi , Long Li , Jiacheng Li , Lin Ye , Lin Yang , Xiaodong He

We propose novel hybrid beamforming schemes for the terahertz (THz) wireless system where a multi-antenna base station (BS) communicates with a multi-antenna user over frequency selective fading. Here, we assume that the BS employs…

Signal Processing · Electrical Eng. & Systems 2020-09-30 Hang Yuan , Nan Yang , Kai Yang , Chong Han , Jianping An

Natural protein sequences somehow encode the structural forms that these molecules adopt. Recent developments in structure-prediction are agnostic to the mechanisms by which proteins fold and represent them as static objects. However, the…

Biomolecules · Quantitative Biology 2025-05-26 Ezequiel A. Galpern , Federico Caamaño , Diego U. Ferreiro

A terahertz metamaterial consisting of radiative slot antennas and subradiant complementary split-ring resonators exhibits plasmon induced opacity in a narrow spectral range due to the destructive interference between the bright and dark…

Protein-protein binding enables orderly and lawful biological self-organization, and is therefore considered a miracle of nature. Protein-protein binding is steered by electrostatic forces, hydrogen bonding, van der Waals force, and…

Biomolecules · Quantitative Biology 2022-02-23 Lin Yang , Shuai Guo , Chengyu Hou , Chencheng Liao , Jiacheng Li , Liping Shi , Xiaoliang Ma , Shenda Jiang , Bing Zheng , Yi Fang , Lin Ye , Xiaodong He
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