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For a beneficial allele which enters a large unstructured population and eventually goes to fixation, it is known that the time to fixation is approximately $2\log(\alpha)/\alpha$ for a large selection coefficient $\alpha$. For a population…

Probability · Mathematics 2016-09-02 Andreas Greven , Peter Pfaffelhuber , Cornelia Pokalyuk , Anton Wakolbinger

We model and study the genetic evolution and conservation of a population of diploid hermaphroditic organisms, evolving continuously in time and subject to resource competition. In the absence of mutations, the population follows a 3-type…

Probability · Mathematics 2012-07-23 Camille Coron

The Wright-Fisher Fokker-Planck equation describes the stochastic dynamics of self-reproducing, competing variants at fixed population size. We use Fisher's angular transformation, which defines a natural length for this stochastic process,…

Populations and Evolution · Quantitative Biology 2015-09-07 Bhavin S. Khatri

Mathematical models of genetic evolution often come in pairs, connected by a so-called duality relation. The most seminal example are the Wright-Fisher diffusion and the Kingman coalescent, where the former describes the stochastic…

Probability · Mathematics 2024-02-02 Jere Koskela , Krzysztof Łatuszyński , Dario Spanò

Recombination is a fundamental evolutionary force, but it is difficult to quantify because the effect of a recombination event on patterns of variation in a sample of genetic data can be hard to discern. Estimators for the recombination…

Populations and Evolution · Quantitative Biology 2023-05-05 Robert C. Griffiths , Paul A. Jenkins

In a view for a simple model where natural selection at the individual level is confronted to selection effects at the group level, we consider some individual-based models of some large population subdivided into a large number of groups.…

Probability · Mathematics 2023-07-13 Aurélien Velleret

We study a system of particles which jump on the sites of the interval $[1,L]$ of $\mathbb Z$. The density at the boundaries is kept fixed to simulate the action of mass reservoirs. The evolution depends on two parameters $\lambda'\ge 0$…

Statistical Mechanics · Physics 2017-10-25 Matteo Colangeli , Anna De Masi , Errico Presutti

Eukaryotic cells demonstrate a wide variety of dynamic patterns of filamentous actin (F-actin) and its regulators. Some of these patterns play important roles in cell functions, such as distinct motility modes, which motivate this study. We…

Pattern Formation and Solitons · Physics 2026-04-13 Jack M. Hughes , Saar Modai , Leah Edelstein-Keshet , Arik Yochelis

In this paper we establish the meta-stability of travelling waves for a class of reaction-diffusion equations forced by a multiplicative noise term. In particular, we show that the phase-tracking technique developed in…

Analysis of PDEs · Mathematics 2020-06-26 Christian Hamster , Hermen Jan Hupkes

Levy walk (LW) process has been used as a simple model for describing anomalous diffusion in which the mean squared displacement of the walker grows non-linearly with time in contrast to the diffusive motion described by simple random walks…

Statistical Mechanics · Physics 2021-10-27 Santanu Das , Anupam Kundu

To model discrete sequences such as DNA, proteins, and language using diffusion, practitioners must choose between three major methods: diffusion in discrete space, Gaussian diffusion in Euclidean space, or diffusion on the simplex. Despite…

An invariant ensemble of $N\times N$ random matrices can be characterised by a joint distribution for eigenvalues $P(\lambda_1,\cdots,\lambda_N)$. The study of the distribution of linear statistics, i.e. of quantities of the form…

Statistical Mechanics · Physics 2017-09-25 Aurélien Grabsch , Christophe Texier

We present a robust method which translates information on the speed of coming down from infinity of a genealogical tree into sampling formulae for the underlying population. We apply these results to population dynamics where the genealogy…

Probability · Mathematics 2012-02-01 Julien Berestycki , Nathanael Berestycki , Vlada Limic

In populations competing for resources, it is natural to ask whether consuming fewer resources provides any selective advantage. To answer this question, we propose a Wright- Fisher model with two types of individuals: the inefficient…

Probability · Mathematics 2020-09-11 Adrian Gonzalez Casanova , Veronica Miro Pina , Juan Carlos Pardo

Reaction-diffusion systems with time-delay defined on complex networks have been studied in the framework of the emergence of Turing instabilities. The use of the Lambert W-function allowed us get explicit analytic conditions for the onset…

Statistical Mechanics · Physics 2016-08-03 Julien Petit , Malbor Asllani , Duccio Fanelli , Ben Lauwens , Timoteo Carletti

We model the growth, dispersal and mutation of two phenotypes of a species using reaction-diffusion equations, focusing on the biologically realistic case of small mutation rates. After verifying that the addition of a small linear mutation…

Analysis of PDEs · Mathematics 2017-09-19 Aled Morris , Luca Börger , Elaine Crooks

In a (two-type) Wright-Fisher diffusion with directional selection and two-way mutation, let $x$ denote today's frequency of the beneficial type, and given $x$, let $h(x)$ be the probability that, among all individuals of today's…

Populations and Evolution · Quantitative Biology 2015-07-10 Ute Lenz , Sandra Kluth , Ellen Baake , Anton Wakolbinger

This paper investigates the stability of the power-law steady state often observed in marine ecosystems. Three dynamical systems are considered, describing the abundance of organisms as a function of body mass and time: a "jump-growth"…

Populations and Evolution · Quantitative Biology 2010-11-29 Samik Datta , Gustav W. Delius , Richard Law , Michael J. Plank

A subdiffusion problem in which the diffusion term is related to a stable stochastic process is introduced. Linear models of these systems have been studied in a general way, but non-linear models require a more specific analysis. The model…

Probability · Mathematics 2021-11-05 Soveny Solís , Vicente Vergara

We investigate the behaviour of the genealogy of a Wright-Fisher population model under the influence of a strong seed-bank effect. More precisely, we consider a simple seed-bank age distribution with two atoms, leading to either classical…

Probability · Mathematics 2014-03-13 Jochen Blath , Bjarki Eldon , Adrián González Casanova , Noemi Kurt