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In rustworkx, we provide a high-performance, flexible graph library for Python. rustworkx is inspired by NetworkX but addresses many performance concerns of the latter. rustworkx is written in Rust and is particularly suited for…

Data Structures and Algorithms · Computer Science 2022-11-03 Matthew Treinish , Ivan Carvalho , Georgios Tsilimigkounakis , Nahum Sá

In the last decade, temporal networks and static and temporal hypergraphs have enabled modelling connectivity and spreading processes in a wide array of real-world complex systems such as economic transactions, information spreading, brain…

Physics and Society · Physics 2023-12-05 Arash Badie-Modiri , Mikko Kivelä

Distributed, large-scale quantum computing will need architectures that combine matter-based qubits with photonic links, but today's software stacks target either gate-based chips or linear-optical devices in isolation. We introduce Optyx,…

We present Pathway, a new unified data processing framework that can run workloads on both bounded and unbounded data streams. The framework was created with the original motivation of resolving challenges faced when analyzing and…

Trajectory data represent a trace of an object that changes its position in space over time. This kind of data is complex to handle and analyze, since it is generally produced in huge quantities, often prone to errors generated by the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-08-31 Salman Haidri , Yaksh J. Haranwala , Vania Bogorny , Chiara Renso , Vinicius Prado da Fonseca , Amilcar Soares

Real-world networks, with their evolving relations, are best captured as temporal graphs. However, existing software libraries are largely designed for static graphs where the dynamic nature of temporal graphs is ignored. Bridging this gap,…

Social and Information Networks · Computer Science 2024-02-07 Razieh Shirzadkhani , Shenyang Huang , Elahe Kooshafar , Reihaneh Rabbany , Farimah Poursafaei

We present mstlo (mistletoe), a Rust library for high-performance online monitoring of signal temporal logic (STL), with Python bindings. The library provides: (i) a unified interface for multiple STL semantics, including Robust…

Reservoir computers (RCs) are among the fastest to train of all neural networks, especially when they are compared to other recurrent neural networks. RC has this advantage while still handling sequential data exceptionally well. However,…

Machine Learning · Computer Science 2022-07-14 Hayden Joy , Marios Mattheakis , Pavlos Protopapas

Retrieval models are key components of Retrieval-Augmented Generation (RAG) systems, which generate search queries, process the documents returned, and generate a response. RAG systems are often dynamic and may involve multiple rounds of…

Information Retrieval · Computer Science 2026-01-16 Eugene Yang , Andrew Yates , Dawn Lawrie , James Mayfield , Trevor Adriaanse

To support parallelizable serverless workflows in applications like media processing, we have prototyped a distributed scheduler called Raptor that reduces both the end-to-end delay time and failure rate of parallelizable serverless…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-16 Kevin Exton , Maria Read

This paper describes the design and implementation of Stingray, a library in Python built to perform time series analysis and related tasks on astronomical light curves. Its core functionality comprises a range of Fourier analysis…

Instrumentation and Methods for Astrophysics · Physics 2019-08-12 D. Huppenkothen , M. Bachetti , A. L. Stevens , S. Migliari , P. Balm , O. Hammad , U. M. Khan , H. Mishra , H. Rashid , S. Sharma , R. V. Blanco , E. M. Ribeiro

Graph neural networks are widely used in machine learning applied to chemistry, and in particular for material science discovery. For crystalline materials, however, generating graph-based representation from geometrical information for…

Materials Science · Physics 2023-07-12 Astrid Klipfel , Yaël Frégier , Adlane Sayede , Zied Bouraoui

Data volumes and rates of research infrastructures will continue to increase in the upcoming years and impact how we interact with their final data products. Little of the processed data can be directly investigated and most of it will be…

Instrumentation and Methods for Astrophysics · Physics 2024-04-23 Michael A. C. Johnson , Hans-Rainer Klöckner , Albina Muzafarova , Kristen Lackeos , David J. Champion , Marta Dembska , Sirko Schindler , Marcus Paradies

The study of trajectories is often a core task in several research fields. In environmental modelling, trajectories are crucial to study fluid pollution, animal migrations, oil slick patterns or land movements. In this contribution, we…

Computation · Statistics 2022-09-23 A. Reyes , G. Viera-López , J. J. Morgado-Vega , E. Altshuler

Performing trajectory design for humanoid robots with high degrees of freedom is computationally challenging. The trajectory design process also often involves carefully selecting various hyperparameters and requires a good initial guess…

Robotics · Computer Science 2024-12-18 Bohao Zhang , Ram Vasudevan

PaPy, which stands for parallel pipelines in Python, is a highly flexible framework that enables the construction of robust, scalable workflows for either generating or processing voluminous datasets. A workflow is created from user-written…

Programming Languages · Computer Science 2014-07-17 Marcin Cieslik , Cameron Mura

We describe the design, implementation and performance of the RADICAL-Pilot task overlay (RAPTOR). RAPTOR enables the execution of heterogeneous tasks -- i.e., functions and executables with arbitrary duration -- on HPC platforms, providing…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-02 Andre Merzky , Matteo Turilli , Shantenu Jha

Networks provide a meaningful way to represent and analyze complex biological information, but the methodological details of network-based tools are often described for a technical audience. Graphery is a hands-on tutorial webserver…

Molecular Networks · Quantitative Biology 2024-02-19 Heyuan Zeng , Jinbiao Zhang , Gabriel A. Preising , Tobias Rubel , Pramesh Singh , Anna Ritz

Robotic Template Library (RTL) is a set of tools for dealing with geometry and point cloud processing, especially in robotic applications. The software package covers basic objects such as vectors, line segments, quaternions, rigid…

Robotics · Computer Science 2021-11-02 Ales Jelinek , Adam Ligocki , Ludek Zalud

In this work, we investigate improving the runtime performance of key computational kernels in the Python Tensor Toolbox (pyttb), a package for analyzing tensor data across a wide variety of applications. Recent runtime performance…

Mathematical Software · Computer Science 2025-10-03 Kimmie Harding , Daniel M. Dunlavy
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