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Whether it be in a man-made machine or a biological system, form and function are often directly related. In the latter, however, this particular relationship is often unclear due to the intricate nature of biology. Here we developed a…

Neurons and Cognition · Quantitative Biology 2020-05-27 Fernanda L. Ribeiro , Steffen Bollmann , Alexander M. Puckett

Recent advances in video generation have revealed an unexpected phenomenon: diffusion-based video models exhibit non-trivial reasoning capabilities. Prior work attributes this to a Chain-of-Frames (CoF) mechanism, where reasoning is assumed…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Ruisi Wang , Zhongang Cai , Fanyi Pu , Junxiang Xu , Wanqi Yin , Maijunxian Wang , Ran Ji , Chenyang Gu , Bo Li , Ziqi Huang , Hokin Deng , Dahua Lin , Ziwei Liu , Lei Yang

Understanding how the brain encodes external stimuli and how these stimuli can be decoded from the measured brain activities are long-standing and challenging questions in neuroscience. In this paper, we focus on reconstructing the complex…

Neurons and Cognition · Quantitative Biology 2022-10-05 Sikun Lin , Thomas Sprague , Ambuj K Singh

The human visual system is an intricate network of brain regions that enables us to recognize the world around us. Despite its abundant lateral and feedback connections, object processing is commonly viewed and studied as a feedforward…

Neurons and Cognition · Quantitative Biology 2019-10-09 Tim C Kietzmann , Courtney J Spoerer , Lynn Sörensen , Radoslaw M Cichy , Olaf Hauk , Nikolaus Kriegeskorte

The human brain can be conceptualized as a dynamical system. Utilizing resting state fMRI time series imaging, we can study the underlying dynamics at ear-marked Regions of Interest (ROIs) to understand structure or lack thereof. This…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Ninad Aithal , Chakka Sai Pradeep , Neelam Sinha

Data produced by resting-state functional Magnetic Resonance Imaging are widely used to infer brain functional connectivity networks. Such networks correlate neural signals to connect brain regions, which consist in groups of dependent…

Methodology · Statistics 2023-12-05 Hanâ Lbath , Alexander Petersen , Sophie Achard

Understanding the relationship between the dynamics of neural processes and the anatomical substrate of the brain is a central question in neuroscience. On the one hand, modern neuroimaging technologies, such as diffusion tensor imaging,…

Primary visual cortex (V1) is the first stage of cortical image processing, and a major effort in systems neuroscience is devoted to understanding how it encodes information about visual stimuli. Within V1, many neurons respond selectively…

Neurons and Cognition · Quantitative Biology 2017-06-21 William F. Kindel , Elijah D. Christensen , Joel Zylberberg

Reasoning over structured graphs remains a fundamental challenge for Large Language Models (LLMs), particularly when scaling to large graphs. Existing approaches typically follow the retrieval-augmented generation (RAG) paradigm: first…

Information Retrieval · Computer Science 2026-03-03 Haoyu Han , Kai Guo , Harry Shomer , Yu Wang , Yucheng Chu , Hang Li , Li Ma , Jiliang Tang

Brain tumor detection can make the difference between life and death. Recently, deep learning-based brain tumor detection techniques have gained attention due to their higher performance. However, obtaining the expected performance of such…

Image and Video Processing · Electrical Eng. & Systems 2022-02-22 Wessam M. Salama , Ahmed Shokry

Open-world egocentric activity recognition poses a fundamental challenge due to its unconstrained nature, requiring models to infer unseen activities from an expansive, partially observed search space. We introduce ProbRes, a Probabilistic…

Computer Vision and Pattern Recognition · Computer Science 2025-10-13 Sanjoy Kundu , Shanmukha Vellamcheti , Sathyanarayanan N. Aakur

As a class of generative artificial intelligence frameworks inspired by statistical physics, diffusion models have shown extraordinary performance in synthesizing complicated data distributions through a denoising process gradually guided…

Machine Learning · Computer Science 2026-04-23 Fangjun Hu , Guangkuo Liu , Yifan F. Zhang , Xun Gao

The reconstruction of visual information from brain activity fosters interdisciplinary integration between neuroscience and computer vision. However, existing methods still face challenges in accurately recovering highly complex visual…

Computer Vision and Pattern Recognition · Computer Science 2026-02-05 Shiyi Zhang , Dong Liang , Hairong Zheng , Yihang Zhou

Head detection and localization is a demanding task and a key element for many computer vision applications, like video surveillance, Human Computer Interaction and face analysis. The stunning amount of work done for detecting faces on RGB…

Computer Vision and Pattern Recognition · Computer Science 2017-11-09 Diego Ballotta , Guido Borghi , Roberto Vezzani , Rita Cucchiara

Brain connectomics is still largely dominated by pairwise-based models, such as graphs, which cannot represent circulatory or higher-order functional interactions. In this paper, we propose a multimodal framework based on Topological Signal…

Neurons and Cognition · Quantitative Biology 2026-04-01 Breno C. Bispo , Stefania Sardellitti , Juliano B. Lima , Fernando A. N. Santos

Diffusion models are initially designed for image generation. Recent research shows that the internal signals within their backbones, named activations, can also serve as dense features for various discriminative tasks such as semantic…

Computer Vision and Pattern Recognition · Computer Science 2024-10-21 Benyuan Meng , Qianqian Xu , Zitai Wang , Xiaochun Cao , Qingming Huang

In neuroscience, understanding inter-individual differences has recently emerged as a major challenge, for which functional magnetic resonance imaging (fMRI) has proven invaluable. For this, neuroscientists rely on basic methods such as…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Akrem Sellami , François-Xavier Dupé , Bastien Cagna , Hachem Kadri , Stéphane Ayache , Thierry Artières , Sylvain Takerkart

Graph-based learning on functional magnetic resonance imaging (fMRI) has shown strong potential for brain network analysis. However, existing methods degrade under cross-site out-of-distribution (OOD) settings because site-conditioned…

Machine Learning · Computer Science 2026-05-08 Yingxu Wang , Kunyu Zhang , Yanwu Yang , Thomas Wolfers , Yujie Wu , Siyang Gao , Nan Yin

We present MindEye, a novel fMRI-to-image approach to retrieve and reconstruct viewed images from brain activity. Our model comprises two parallel submodules that are specialized for retrieval (using contrastive learning) and reconstruction…

Embodied visual planning aims to enable manipulation tasks by imagining how a scene evolves toward a desired goal and using the imagined trajectories to guide actions. Video diffusion models, through their image-to-video generation…

Computer Vision and Pattern Recognition · Computer Science 2025-12-30 Yuming Gu , Yizhi Wang , Yining Hong , Yipeng Gao , Hao Jiang , Angtian Wang , Bo Liu , Nathaniel S. Dennler , Zhengfei Kuang , Hao Li , Gordon Wetzstein , Chongyang Ma
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