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We present an algorithm to compute path homology for simple digraphs, and use it to topologically analyze various small digraphs en route to an analysis of complex temporal networks which exhibit such digraphs as underlying motifs. The…

Social and Information Networks · Computer Science 2021-01-15 Samir Chowdhury , Steve Huntsman , Matvey Yutin

Chain distance between points in a metric space is defined as the infimum of epsilon such that there is an epsilon-chain connecting these points. We call a mapping of a metric compact into the real line a chain development if it preserves…

Metric Geometry · Mathematics 2016-04-05 Yu. V. Malykhin , E. V. Shchepin

We describe a birational map between subvarieties in the character varieties of mutative 3-manifolds. By studying the birational map, one can decide in certain circumstances whether a mutation surface is detected by an ideal point of the…

Geometric Topology · Mathematics 2014-10-01 Stephan Tillmann

It is well known that a three dimensional (closed, connected and compact) manifold is obtained by identifying boundary faces from a polyhedron P. The study of (\partial P)/~, the boundary \partial P with the polygonal faces identified in…

General Mathematics · Mathematics 2007-05-23 Sergey Nikitin

A path with three blocks $P(k,l,r)$ is an oriented path formed by $k$-forward arcs followed by $l$-backward arcs then $r$-forward arcs. We prove that any $(2k+1)$-chromatic digraph contains a path $P(1,k,1)$. However the existence of…

Combinatorics · Mathematics 2021-10-20 Maidoun Mortada , Amine El Sahili , Zahraa Mohsen

Rod packings are used in crystallography to describe crystal structures with linear or zigzag chains of particles, and each rod packing can be topologically viewed as a collection of disjoint geodesics in the 3-torus. Hui and Purcell…

Geometric Topology · Mathematics 2025-12-23 Connie On Yu Hui

Data describing the three-dimensional structure of physical networks is increasingly available, leading to a surge of interest in network science to explore the relationship between the shape and connectivity of physical networks. We…

Physics and Society · Physics 2024-08-20 Luka Blagojević , Márton Pósfai

A fundamental goal of research in molecular biology is to understand protein structure. Protein crystallography is currently the most successful method for determining the three-dimensional (3D) conformation of a protein, yet it remains…

Artificial Intelligence · Computer Science 2014-11-17 L. Leherte , J. Glasgow , K. Baxter , E. Steeg , S. Fortier

We construct a family of 1-convex threefolds, with exceptional curve C of type (0,-2), which are not embeddable in C^m \times CP_n. In order to show that they are not Kaehler we exhibit a real 3-dimensional chain A whose boundary is the…

Complex Variables · Mathematics 2007-05-23 Giovanni Bassanelli , Marco Leoni

The goal of this article is to survey recent developments in the theory of contact structures in dimension three.

Geometric Topology · Mathematics 2007-05-23 Ko Honda

R-circles in general three dimensional CR manifolds (of contact type) are the analogues to traces of Lagrangian totally geodesic planes on the sphere viewed as the boundary of two dimensional complex hyperbolic space. They form a family of…

Differential Geometry · Mathematics 2013-07-30 E. Falbel , J. M. Veloso

A parameter of a mathematical model is structurally identifiable if it can be determined from noiseless experimental data. Here, we examine the identifiability properties of two important classes of linear compartmental models:…

This is a companion paper of arXiv:1901.09461, where different notions of dimension for triangulated categories are discussed. Here we compute dimensions for some examples of triangulated categories and thus illustrate and motivate material…

Algebraic Geometry · Mathematics 2020-04-10 Alexey Elagin

We consider a certain linear recursive relation with integer parameters and study some of its algebraic and geometric properties, with the purpose of estimating the number of chains of valences in the Farey series.

Number Theory · Mathematics 2014-11-06 Cristian Cobeli , Alexandru Zaharescu

A new class of distances for graph vertices is proposed. This class contains parametric families of distances which reduce to the shortest-path, weighted shortest-path, and the resistance distances at the limiting values of the family…

Combinatorics · Mathematics 2011-01-25 Pavel Chebotarev

In the first part of this work the classical and statistical aspects of the dynamics of an inextensible chain in three dimensions are investigated. In the second part the special case of a chain admitting only fixed angles with respect to…

Statistical Mechanics · Physics 2009-05-22 Franco Ferrari , Jaroslaw Paturej , Thomas A. Vilgis

Two structures are said to be equimorphic if each embeds in the other. Such structures cannot be expected to be isomorphic, and in this paper we investigate the special case of linear orders, here also called chains. In particular we…

Combinatorics · Mathematics 2014-07-11 C. Laflamme , M. Pouzet , R. Woodrow

We constructed a parametrized family of Mordell curves with the rank of at least three.

General Mathematics · Mathematics 2024-03-18 Seiji Tomita

In nature the three-dimensional structure of a protein is encoded in the corresponding gene. In this paper we describe a new method for encoding the three-dimensional structure of a protein into a binary sequence. The feature of the method…

Combinatorics · Mathematics 2007-05-23 Naoto Morikawa

Given a smooth family of unparameterized curves such that through every point in every direction there passes exactly one curve, does there exist a Lagrangian with extremals being precisely this family? It is known that in dimension 2 the…

Differential Geometry · Mathematics 2022-12-07 Boris S. Kruglikov , Vladimir S. Matveev