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Mathematical models in epidemiology are an indispensable tool to determine the dynamics and important characteristics of infectious diseases. Apart from their scientific merit, these models are often used to inform political decisions and…

Phenomenological and deterministic models are often used for the estimation of transmission parameters in an epidemic and for the prediction of its growth trajectory. Such analyses are usually based on single peak outbreak dynamics. In…

Populations and Evolution · Quantitative Biology 2022-01-20 D. P. Mahapatra , S. Triambak

An analysis of the COVID-19 epidemic is proposed on the basis of the epiMOX dashboard (publicly accessible at https://www.epimox.polimi.it) that deals with data of the epidemic trends and outbreaks in Italy from late February 2020. Our…

Populations and Evolution · Quantitative Biology 2021-05-25 Nicola Parolini , Giovanni Ardenghi , Luca Dede' , Alfio Quarteroni

The Covid-19 pandemic presented an unprecedented global public health emergency, and concomitantly an unparalleled opportunity to investigate public responses to adverse social conditions. The widespread ability to post messages to social…

Social and Information Networks · Computer Science 2022-06-20 Richard Plant , Amir Hussain

We present a stochastic epidemic model to study the effect of various preventive measures, such as uniform reduction of contacts and transmission, vaccination, isolation, screening and contact tracing, on a disease outbreak in a…

Populations and Evolution · Quantitative Biology 2022-07-08 Martina Favero , Gianpaolo Scalia Tomba , Tom Britton

Outbreaks are complex multi-scale processes that are impacted not only by cellular dynamics and the ability of pathogens to effectively reproduce and spread, but also by population-level dynamics and the effectiveness of mitigation…

Physics and Society · Physics 2023-03-29 Hosein Masoomy , Tom Chou , Lucas Böttcher

We investigate adaptive strategies to robustly and optimally control the COVID-19 pandemic via social distancing measures based on the example of Germany. Our goal is to minimize the number of fatalities over the course of two years without…

Populations and Evolution · Quantitative Biology 2021-02-09 Johannes Köhler , Lukas Schwenkel , Anne Koch , Julian Berberich , Patricia Pauli , Frank Allgöwer

The response of many governments to the COVID-19 pandemic has involved measures to control within- and between-household transmission, providing motivation to improve understanding of the absolute and relative risks in these contexts. Here,…

After the introduction of drastic containment measures aimed at stopping the epidemic contagion from SARS-CoV2, many governments have adopted a strategy based on a periodic relaxation of such measures in the face of a severe economic crisis…

Populations and Evolution · Quantitative Biology 2021-06-10 Giacomo Albi , Lorenzo Pareschi , Mattia Zanella

We show that qualitatively different epidemic-like processes from distinct societal domains (finance, social and commercial blockbusters, epidemiology) can be quantitatively understood using the same unifying conceptual framework taking…

Motivated by foot-and-mouth disease (FMD) outbreak data from Turkey, we develop a model to estimate disease risk based on a space-time record of outbreaks. The spread of infectious disease in geographical units depends on both transmission…

Applications · Statistics 2021-10-19 Xiaoxiao Li , Matthew Ferrari , Michael J. Tildesley , Murali Haran

The COVID-19 outbreak was initially reported in Wuhan, China, and it has been declared as a Public Health Emergency of International Concern (PHEIC) on 30 January 2020 by WHO. It has now spread to over 180 countries, and it has gradually…

Applications · Statistics 2021-05-04 Jiawei Long

Early estimates of the transmission potential of emerging and re-emerging infections are increasingly used to inform public health authorities on the level of risk posed by outbreaks. Existing methods to estimate the reproduction number…

Quantitative Methods · Quantitative Biology 2016-10-10 Gerardo Chowell , Cécile Viboud , Lone Simonsen , Seyed Moghadas

Social distancing and lockdown are the two main non-pharmaceutical interventions being used by the UK government to contain and control the COVID-19 epidemic; these are being applied uniformly across the entire country, even though the…

Populations and Evolution · Quantitative Biology 2020-04-28 L C G Rogers

We investigate a model for spatial epidemics explicitly taking into account bi-directional movements between base and destination locations on individual mobility networks. We provide a systematic analysis of generic dynamical features of…

Physics and Society · Physics 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

The novel coronavirus SARS-CoV-2 and resulting COVID-19 disease have had an unprecedented spread and continue to cause an increasing number of fatalities worldwide. While vaccines are still under development, social distancing, extensive…

Populations and Evolution · Quantitative Biology 2020-07-02 Calvin Tsay , Fernando Lejarza , Mark A. Stadtherr , Michael Baldea

In retrospective assessments, internet news reports have been shown to capture early reports of unknown infectious disease transmission prior to official laboratory confirmation. In general, media interest and reporting peaks and wanes…

Social and Information Networks · Computer Science 2016-06-02 Saurav Ghosh , Prithwish Chakraborty , Elaine O. Nsoesie , Emily Cohn , Sumiko R. Mekaru , John S. Brownstein , Naren Ramakrishnan

We investigate the mechanisms behind the quasi-periodic outbursts on the Covid-19 epidemics. Data for France and Germany show that the patterns of outbursts exhibit a qualitative change in early 2022, which appears in a change in their…

Populations and Evolution · Quantitative Biology 2023-10-04 Michel Peyrard

The design of models that govern diseases in population is commonly built on information and data gathered from past outbreaks. However, epidemic outbreaks are never captured in statistical data alone but are communicated by narratives,…

Computation and Language · Computer Science 2023-06-22 Arlene Casey , Mike Bennett , Richard Tobin , Claire Grover , Iona Walker , Lukas Engelmann , Beatrice Alex

The Bayesian analysis of infectious disease surveillance data from multiple locations typically involves building and fitting a spatio-temporal model of how the disease spreads in the structured population. Here we present new generally…

Methodology · Statistics 2025-03-04 Matthew Adeoye , Xavier Didelot , Simon EF Spencer