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Oscillatory biochemical signals and mechanical forces must coordinate robustly during development, yet the principles governing their mutual coupling remain poorly understood. In syncytial embryos and cell-free extracts, mitotic waves…

Biological Physics · Physics 2026-01-12 Lara Koehler , Elissavet Sandaltzopoulou , Frank Jülicher , Jan Brugués

We study the time evolution and driven motion of thin liquid films lying on top of chemical patterns on a substrate. Lattice-Boltzmann and molecular dynamics methods are used for simulations of the flow of microscopic and nanoscopic films,…

Soft Condensed Matter · Physics 2012-04-04 Fabian Dörfler , Markus Rauscher , Joel Koplik , Jens Harting , S. Dietrich

We numerically study the dynamics of a passive fluid droplet confined within a microchannel whose walls are covered with a thin layer of active gel. The latter represents a fluid of extensile material modelling, for example, a suspension of…

Soft Condensed Matter · Physics 2023-08-10 A. Tiribocchi , M. Durve , M. Lauricella , A. Montessori , S. Succi

Electrical waves in the heart form rotating spiral or scroll waves during life-threatening arrhythmias such as atrial or ventricular fibrillation. The wave dynamics are typically modeled using coupled partial differential equations, which…

Medical Physics · Physics 2024-10-07 Tanish Baranwal , Jan Lebert , Jan Christoph

To control structure-function relationships in solids with light, we must harness the shape of the potential energy surface, as expressed in anharmonic coupling coefficients. We use two-dimensional terahertz (THz) spectroscopy to identify…

Patterns and waves are basic and important phenomena that govern the dynamics of physical and biological systems. A common theme in investigating such systems is to identify the intrinsic factors responsible for such self-organization. The…

Analysis of PDEs · Mathematics 2018-06-25 Chao-Nien Chen , Y. S. Choi , Nicola Fusco

We propose and analyze the suitability of a spiking controller to engineer the locomotion of a soft robotic crawler. Inspired by the FitzHugh-Nagumo model of neural excitability, we design a bistable controller with an electrical flipflop…

Systems and Control · Electrical Eng. & Systems 2024-06-03 Juncal Arbelaiz , Alessio Franci , Naomi Ehrich Leonard , Rodolphe Sepulchre , Bassam Bamieh

Correlating neural communication in brain networks with behavior and cognition can provide fundamental insights into the functionality of both healthy and diseased brains. We demonstrate how communication in the brain can be estimated from…

Signal Processing · Electrical Eng. & Systems 2023-06-21 Felix Schwock , Julien Bloch , Les Atlas , Shima Abadi , Azadeh Yazdan-Shahmorad

The morphogenesis of cells and tissues involves an interplay between chemical signals and active forces on their surrounding surface layers. The complex interaction of hydrodynamics and material flows on such active surfaces leads to…

Cell Behavior · Quantitative Biology 2023-06-30 Sebastian Aland , Claudia Wohlgemuth

We illustrate the potential of neuromorphic control on the simple mechanical model of a pendulum, with both event-based actuation and sensing. The controller and the pendulum are regarded as event-based systems that occasionally interact to…

Systems and Control · Electrical Eng. & Systems 2024-06-26 Raphael Schmetterling , Fulvio Forni , Alessio Franci , Rodolphe Sepulchre

Coherent control of traveling acoustic excitations in a waveguide system is an interesting way to manipulate and transduce classical and quantum information. So far, these interactions, often based on optomechanical resonators or Brillouin…

Quantum Physics · Physics 2022-04-05 Junyin Zhang , Changlong Zhu , Christian Wolff , Birgit Stiller

We establish nonlinear stability of fronts that describe the creation of a periodic pattern through the invasion of an unstable state. Our results concern pushed fronts, that is, fronts whose propagation is driven by a localized mode at the…

Analysis of PDEs · Mathematics 2026-03-27 Montie Avery , Paul Carter , Björn de Rijk

Estimating three-dimensional conformations of a molecular graph allows insight into the molecule's biological and chemical functions. Fast generation of valid conformations is thus central to molecular modeling. Recent advances in…

Machine Learning · Computer Science 2025-02-18 Sohil Atul Shah , Vladlen Koltun

We study synchronization and rhythmic patterns generated in the heterogeneous cluster of FitzHugh$-$Nagumo oscillators with transition between self-oscillating and excitable elements. Such cluster models the sinoatrial node of the heart,…

Pattern Formation and Solitons · Physics 2018-12-14 V. A. Kostin , G. V. Osipov

A pinned-free beam in axial fluid flow, subjected to feedback-based actuation at the pinned end, is investigated. The actuation may be a moment or a prescribed angle and it is proportional to the state (curvature, slope, or displacement) of…

Fluid Dynamics · Physics 2023-02-07 Sanders Aspelund , Ranjan Mukherjee , Aren Hellum

In this paper we present the results of parallel numerical computations of the long-term dynamics of linked vortex filaments in a three-dimensional FitzHugh-Nagumo excitable medium. In particular, we study all torus links with no more than…

Pattern Formation and Solitons · Physics 2019-03-07 Fabian Maucher , Paul Sutcliffe

We study the propagation of monochromatic surface waves on a turbulent flow. The flow is generated in a layer of liquid metal by an electromagnetic forcing. This forcing creates a quasi two-dimensional (2D) turbulence with strong vertical…

Fluid Dynamics · Physics 2015-11-19 Pablo Gutiérrez , Sébastien Aumaitre

We present an experimental and numerical study of immiscible two-phase flow in 3-dimensional (3D) porous media to find the relationship between the volumetric flow rate ($Q$) and the total pressure difference ($\Delta P$) in the steady…

We present a novel methodology to enable control of a neuromorphic circuit in close analogy with the physiological neuromodulation of a single neuron. The methodology is general in that it only relies on a parallel interconnection of…

Neurons and Cognition · Quantitative Biology 2020-11-19 Luka Ribar , Rodolphe Sepulchre

The quintessential property of neuronal systems is their intensive patterns of selective synaptic connections. The current work describes a physics-based approach to neuronal shape modeling and synthesis and its consideration for the…

Neurons and Cognition · Quantitative Biology 2009-11-10 Luciano da Fontoura Costa , Regina Celia Coelho